Gene YpAngola_A1988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A1988 
Symboluup 
ID5800458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp2074436 
End bp2076349 
Gene Length1914 bp 
Protein Length637 aa 
Translation table11 
GC content49% 
IMG OID641339911 
ProductABC transporter ATPase component 
Protein accessionYP_001606461 
Protein GI162419191 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTTAA TTAGCATGTC TGGAGCCTGG CTGTCGTTCA GCGATGCACC TTTATTAGAT 
AACACTGAAT TACATATCGA GGCGAACGAG CGTGTTTGTC TGGTGGGCCG CAACGGTGCG
GGCAAATCCA CCTTGCTTAA AATTCTAAGT AAAGAAGTTG CATTAGATGA TGGCCGAATC
ATTTATGAAC AGGATCTGAT TGTGGCGCGT CTGCAACAAG ATCCGCCGCG TAATGTGGCC
GGTACCGTGT TTGATTTTGT GGCTGAAGGG GTGCAGGAAC AGGCTGAACA TCTAAAAGCC
TATCACGCAA CGCTGCATCA GGTAGAACTG GATCCGAGTG AAAAAAATCT CAATCGCTTA
GCGGCATTGC AAGAAATTCT GGATCACCAA GGGTTGTGGC AACTGGATAG CCGTATTCAA
GAAGTGCTGG TTCAACTGGG GTTATCCGCT GATGCTGAAC TTTCTTCACT GTCGGGCGGT
TGGTTGCGCA AAGCGGCACT AGGCCGTGCA TTGGTAAGCT CACCAAAAGT GTTATTACTG
GATGAACCAA CCAACCACCT GGATATCGAA ACCATCAACT GGCTGGAAGG CTTCCTGAAA
GAGTTCCAGG GCAGCATTGT ATTTATCTCC CATGACCGCT CCTTTATTCG TGCAATGGCG
ACCCGTATTG TGGATTTGGA TCGCGGTAAA TTGGTTTCAT GGCCGGGTAA CTATGAGCTG
TATCTTGCCA GCAAAGAAGA AGCCTTGCGG GTTGAAGAGC TGCAAAACGC TGAATTTGAC
CGCAAACTGG CCCAAGAAGA AGTCTGGATA CGCCAGGGCA TCAAAGCGCG CCGTACCCGT
AACGAAGGCC GCGTTCGTGC GCTGAAAGCG TTACGGATGG AACGTTCGCA GCGCCGTGAG
GTGATGGGCA CCGCCAAGAT GCAAGTGGAA GAGACGGTAC GTTCTGGCAA AATTGTCTTC
GATCTGGAAA ATGTTAATTA TCAGATTGAT GGTAAAGTAC TGGTGAAAGA TTTCACCGCT
CAAGTACAGC GTGGTGACAA AATTGCGTTG GTGGGGCCAA ATGGCTGCGG TAAGACGACC
TTACTGAAAC TGATGCTCGG TCAGCTTAAC GCGGACAGCG GTAAAGTGCA TTGCGGGACC
AAGCTGGAAG TCGCCTATTT TGACCAGCAT CGTGCGGAGC TGGATCCCGA GCGCACGGTT
ATGGATAACC TGGCGGAAGG TAAGCAAGAA GTGATGGTAA ATGGCCGTTC ACGTCATGTA
CTGGGCTATC TGCAAGATTT CCTATTCCAC CCTAAACGTG CGATGACACC GGTGAAAGCT
TTGTCTGGTG GCGAGCGCAA CCGTCTGTTA TTGGCCAAAT TATTCCTTAA GCCAAGTAAC
TTGCTGATCC TCGATGAACC AACCAATGAC TTGGATGTTG AGACACTGGA ATTGCTGGAA
GAGATGGTCG ATAGCTATCA GGGCACCGTA CTGTTGGTTA GTCATGACCG TCAATTCGTT
GATAACTCAG TGACTGAATG TTGGATCTTT GAAGGCAATG GTCAAATCAA CAGCTTCGTT
GGCGGCTATT ATGATGCGCA TCAACAACGG GCAGAGGCCA AGCCGATTCG TCAGGCCGCA
CTTAAGATTG AAGAAACCAA AGCGTCTACT TCGGTTAAAA GCCCTGCACC CGCGGCTAAA
AAACCCGGTA AATTGAGCTA TAACTTACAA CGTGAGTTGG ATCAGTTGCC GCAACAGCTA
GAAAAATTGG AAAATGATAT CAGCAAGTTA CAGGCTGAAG TCAGTGATAC TGATTTCTTT
TCCCGCCCAC ACGAAGAGAC TCAACAGGTT TTGAAAACCC TGGCTGATAC TGAGCAGGCG
TTAGAGGTGG CATTCAGTCG TTGGGAAGAG CTGGAAGCTC AGAAAAACGG CTAA
 
Protein sequence
MSLISMSGAW LSFSDAPLLD NTELHIEANE RVCLVGRNGA GKSTLLKILS KEVALDDGRI 
IYEQDLIVAR LQQDPPRNVA GTVFDFVAEG VQEQAEHLKA YHATLHQVEL DPSEKNLNRL
AALQEILDHQ GLWQLDSRIQ EVLVQLGLSA DAELSSLSGG WLRKAALGRA LVSSPKVLLL
DEPTNHLDIE TINWLEGFLK EFQGSIVFIS HDRSFIRAMA TRIVDLDRGK LVSWPGNYEL
YLASKEEALR VEELQNAEFD RKLAQEEVWI RQGIKARRTR NEGRVRALKA LRMERSQRRE
VMGTAKMQVE ETVRSGKIVF DLENVNYQID GKVLVKDFTA QVQRGDKIAL VGPNGCGKTT
LLKLMLGQLN ADSGKVHCGT KLEVAYFDQH RAELDPERTV MDNLAEGKQE VMVNGRSRHV
LGYLQDFLFH PKRAMTPVKA LSGGERNRLL LAKLFLKPSN LLILDEPTND LDVETLELLE
EMVDSYQGTV LLVSHDRQFV DNSVTECWIF EGNGQINSFV GGYYDAHQQR AEAKPIRQAA
LKIEETKAST SVKSPAPAAK KPGKLSYNLQ RELDQLPQQL EKLENDISKL QAEVSDTDFF
SRPHEETQQV LKTLADTEQA LEVAFSRWEE LEAQKNG