| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A1976 |
|---|
| Symbol | |
|---|
| ID | 5800447 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | - |
|---|
| Start bp | 2058770 |
|---|
| End bp | 2059960 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641339900 |
|---|
| Product | aromatic amino acid aminotransferase |
|---|
| Protein accession | YP_001606450 |
|---|
| Protein GI | 162421411 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1448] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0279387 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 0.804208 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGAAA AAATTACTGC TGCACCTGCG GATCCTATTT TAGGTTTGAC CGATATCTTC
CGCGCGGATG ACCGCGCTCA TAAAATCAAT CTGGGGATCG GTGTCTACAA AGACGAAACC
GGTAAAACCC CAGTGCTGAC CAGCGTGAAG AAAGCTGAGC AGTATTTACT GGAAAATGAA
GCTACCAAAA ATTATCTGGG TATTGACGGC CTGCCTGTTT TTGCCAGTTG CACCCAAGAA
CTGCTGTTCG GTGCTAATAG TGCAATTATT GCGGATAAAC GTGCTCGTAC CGCTCAAACG
CCAGGTGGTA CCGGTGGTTT GCGCATTGCC GCTGATTTTA TCGCCCATCA GACCAGCGCT
AAACGTGTCT GGGTCAGTAA CCCAAGCTGG CCAAACCATA AAAACGTCTT CGAAGCCGCA
GGGCTGGAAG TGGTGGAGTA CGCTTATTAT GATGCTGCTA ACCATGCATT GGACTTCGAT
GGCTTGTTAA ATAGCCTGTC AGAAGCTCAG GCGGGTGATG TGGTGTTGTT CCACGGCTGC
TGCCATAACC CAACGGGTAT CGACCCAACA GAAACTCAGT GGAGCCAACT GGCGGAGTTA
TCGGTTGCTA AAGGCTGGTT GCCACTGTTT GATTTCGCTT ATCAAGGCTT TGCCAACGGT
TTGGAAGAAG ATGCTCAGGG CCTGCGTATT TTCGCGGCAA CACATCAAGA GTTGATCGTT
TGCAGCTCTT ATTCGAAAAA CTTTGGTTTG TACAATGAAC GTGTTGGGGC TTGTACCCTT
GTCGCCGCCG ACAGTAACGT TGCCGATACC GCATTCAGCC AAGTTAAAGC GGTTATCCGA
GCCAACTACT CTAACCCACC GGCACATGGT GCATCAGTCG TTGCCACTAT TCTGAGTAAT
GCCGCACTAC GGGCGATTTG GGAACAAGAA CTGACCGATA TGCGTCAGCG CATCCAACGT
ATGCGTCAGT TGTTTGTTAA TACCTTGCAG GAAAAAGGCG CTCAACAAGA TTTTAGCTTT
ATCATTAACC AGAATGGGAT GTTCTCGTTC AGTGGTCTGA CCAAAGAACA AGTGCTGCGC
CTGCGTGATG AGTTCGCCGT CTATGCGGTA AATTCTGGCC GGGTTAACGT GGCGGGGATG
ACACCAGACA ATATGGCGCC GTTATGTGAA GCTATCGTTG CGGTGCTCTA A
|
|---|
| Protein sequence | MFEKITAAPA DPILGLTDIF RADDRAHKIN LGIGVYKDET GKTPVLTSVK KAEQYLLENE
ATKNYLGIDG LPVFASCTQE LLFGANSAII ADKRARTAQT PGGTGGLRIA ADFIAHQTSA
KRVWVSNPSW PNHKNVFEAA GLEVVEYAYY DAANHALDFD GLLNSLSEAQ AGDVVLFHGC
CHNPTGIDPT ETQWSQLAEL SVAKGWLPLF DFAYQGFANG LEEDAQGLRI FAATHQELIV
CSSYSKNFGL YNERVGACTL VAADSNVADT AFSQVKAVIR ANYSNPPAHG ASVVATILSN
AALRAIWEQE LTDMRQRIQR MRQLFVNTLQ EKGAQQDFSF IINQNGMFSF SGLTKEQVLR
LRDEFAVYAV NSGRVNVAGM TPDNMAPLCE AIVAVL
|
|---|
| |