Gene YpAngola_A1955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A1955 
SymbolrpsA 
ID5800425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp2032783 
End bp2034456 
Gene Length1674 bp 
Protein Length557 aa 
Translation table11 
GC content48% 
IMG OID641339879 
Product30S ribosomal protein S1 
Protein accessionYP_001606429 
Protein GI162420786 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0539] Ribosomal protein S1 
TIGRFAM ID[TIGR00717] ribosomal protein S1 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.32161e-06 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.358522 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGAAT CTTTTGCTCA ACTCTTTGAA GAATCCCTGA AAACAATTGA AACACGTCCG 
GGCTCTATCG TCCGTGGTGT TGTTGTTTCT ATCGATAAAG ATATCGTACT GGTTGACGCT
GGTCTGAAAT CTGAGTCAGC AATTCCAGCA GAACAGTTCA AGAACGCGCA AGGCGAACTG
GAAATTCAAG TTGGTGACGA AGTTGATGTT GCTCTGGACG CTGTTGAAGA CGGCTTCGGT
GAAACTCTGC TGTCCCGTGA GAAAGCTAAG CGTCACGAAG CATGGCTGAT GCTGGAAAAA
GCTTACGAAG AAGCTGCAAC CGTTACTGGT GTGATCAACG GCAAAGTGAA GGGCGGCTTT
ACAGTCGAAC TGAACGGTAT CCGTGCGTTC CTGCCTGGTT CACTGGTTGA TGTGCGTCCA
GTTCGCGATA CTCTGCATCT GGAAGGCAAA GAGCTTGAGT TCAAAGTCAT CAAGCTGGAT
CAGAAACGCA ACAACGTCGT TGTTTCTCGT CGTGCAGTTA TCGAATCCGA GAACAGCGCT
GAGCGTGATC AACTGCTGGA AAACCTGCAA GAAGGCATGG AAGTCAAGGG TATCGTTAAG
AACCTGACTG ACTACGGTGC ATTCGTTGAC CTGGGTGGCG TTGATGGCTT GCTGCACATC
ACTGACATGG CTTGGAAACG TGTTAAACAC CCAAGCGAAA TCGTCAATGT GGGCGACGAA
ATCACTGTTA AAGTTCTGAA ATTCGACCGC GAACGTACTC GTGTATCCCT TGGCTTGAAA
CAACTGGGCG AAGATCCATG GGTTGCTATC GCTAAACGTT ACCCAGAAAG CACTAAGCTG
ACTGGTCGTG TGACTAACCT GACTGATTAC GGTTGCTTCG TAGAAATCGA AGAAGGCGTT
GAAGGTTTGG TACACGTTTC AGAAATGGAT TGGACCAACA AAAACATTCA CCCGTCTAAA
GTTGTTAACG TTGGCGACGT AGTGGAAGTT ATGGTTCTGG ACATCGATGA AGAACGTCGT
CGTATTTCTC TGGGCCTGAA ACAGTGCAAA TCTAACCCAT GGCAGCTGTT TGCAGAAACC
CACAACAAAA ACGACTGCGT TGAAGGTAAA ATCAAGTCTA TCACTGACTT CGGTATCTTC
ATCGGCTTGG ACGGCGGCAT CGACGGCCTG GTTCACCTGT CTGATATCTC CTGGAACGTT
GCAGGCGAAG AAGCAGTTCG TGAATACAAG AAAGGCGACG AAATCGCAGC TGTGGTTCTG
CAGGTTGACG CAGAACGTGA GCGTATCTCC TTAGGCGTGA AACAACTGGC AGAAGACCCG
TTCAATAACT ACCTGTCTGT TAACAAGAAA GGTGCTATTG TTACTGGTAA AGTAACTGCA
GTTGACGCTA AAGGTGCTAC AGTTGAATTG GCTGGCGGCG TAGAAGGTTA TCTGCGTGCT
TTCGAAGCAA CTCGTGACCG CGTTGAAGAT GCGACGCTGG TTCTGAACGT AGGTGATGAA
GTTGAAGCCA AATATACTGG CGTTGACCGT AAAAACCGCG TAATCAGCCT GTCTGTTCGT
GCTAAAGACG AAGCTGATGA GAAAGATGCT ATTGCTACGG TTAACACCAA GCCAGAAGAA
AGTAATTTCT CTAGCGCAAT GGCTGAAGCG TTCAAAGCTG CGAAAGGCGA GTAA
 
Protein sequence
MIESFAQLFE ESLKTIETRP GSIVRGVVVS IDKDIVLVDA GLKSESAIPA EQFKNAQGEL 
EIQVGDEVDV ALDAVEDGFG ETLLSREKAK RHEAWLMLEK AYEEAATVTG VINGKVKGGF
TVELNGIRAF LPGSLVDVRP VRDTLHLEGK ELEFKVIKLD QKRNNVVVSR RAVIESENSA
ERDQLLENLQ EGMEVKGIVK NLTDYGAFVD LGGVDGLLHI TDMAWKRVKH PSEIVNVGDE
ITVKVLKFDR ERTRVSLGLK QLGEDPWVAI AKRYPESTKL TGRVTNLTDY GCFVEIEEGV
EGLVHVSEMD WTNKNIHPSK VVNVGDVVEV MVLDIDEERR RISLGLKQCK SNPWQLFAET
HNKNDCVEGK IKSITDFGIF IGLDGGIDGL VHLSDISWNV AGEEAVREYK KGDEIAAVVL
QVDAERERIS LGVKQLAEDP FNNYLSVNKK GAIVTGKVTA VDAKGATVEL AGGVEGYLRA
FEATRDRVED ATLVLNVGDE VEAKYTGVDR KNRVISLSVR AKDEADEKDA IATVNTKPEE
SNFSSAMAEA FKAAKGE