Gene YpAngola_A1945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A1945 
Symbol 
ID5800415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp2017967 
End bp2018476 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content46% 
IMG OID641339869 
ProductIS1541 transposase 
Protein accessionYP_001606419 
Protein GI162418736 
COG category[L] Replication, recombination and repair 
COG ID[COG1943] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000772638 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.100014 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGGTCTG GCAACTGCAA ATGTTCAACA AGAAATCAAA AGGGGGTCCC AATGAGGGAT 
GAAAAGAGCT TAGCGCACAC CCGATGGAAC TGTAAATATC ATATAGTTTT TGCGCCGAAG
TACCGAAGGC AGGTGTTCTA CAGGGAAAAA CGCAGAGCGA TTGGCAGTAT TTTAAGAAAA
CTGTGCGAAT GGAAAAACGT GAATATCCTG GAAGCAGAAT ACTGTGTGGA TCACATCCAT
ATGCTTCTGG AGATCCCGCC CAAGATGAGT GTCTCGGGAT TTATGGGGTA CCTGAAGGGA
AAGAGCAGTC TGATGCTTTA TGAGCAGTTT GGCGATTTGA AGTTCAAATA CCGTAACAGG
GAGTTTTGGT GTCGAGGGTA TTACGTTGAT ACGGTAGGGA AAAACACGGC CAGGATACAA
GAATACATAA AGCACCAATT GGAAGAGGAT AAAATGGGTG AGCAACTCTC GAGCCCGTAT
CCCGGTAGCC CGTTTACGGG CCGTAAGTAA
 
Protein sequence
MRSGNCKCST RNQKGVPMRD EKSLAHTRWN CKYHIVFAPK YRRQVFYREK RRAIGSILRK 
LCEWKNVNIL EAEYCVDHIH MLLEIPPKMS VSGFMGYLKG KSSLMLYEQF GDLKFKYRNR
EFWCRGYYVD TVGKNTARIQ EYIKHQLEED KMGEQLSSPY PGSPFTGRK