Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A1821 |
Symbol | |
ID | 5800292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 1887187 |
End bp | 1889079 |
Gene Length | 1893 bp |
Protein Length | 630 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641339754 |
Product | citrate transporter family protein |
Protein accession | YP_001606309 |
Protein GI | 162420408 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0471] Di- and tricarboxylate transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTCACT GCCAGAGCCG GATATTCTCT TTCACTTTTT GTTTTGCCAA CGAGGCCATT TTGAACAGCG AACTACTGTG GGTGTTGACG CTACTGCTGA TAGCTATTGT GCTGTTTACC ACGAATAAAC TGCGAATGGA TGTCGTCGCG TTGTTGGTGA TTATTGCCTT TGTGATGAGT GGAACATTGT CATTATCTGA GGCTACCAGT GGGTTCAGTG ATCCCAATGT TATCTTGATT GCTGCGTTGT TTGTGATTGG TGAAGGGTTA GTCAGGACTG GTGTCGCCTA CCAAATGGGT GATTGGTTGG TGAAAGTGGC CGGCCACAGT GAAACAAAAA TGTTAGCGTT GCTAATGGTT ACCGTCGCCG GATTGGGTGC CTTTATGAGT TCAACTGGCG TCGTGGCGAT TTTTATTCCA GTGGTACTGA GTGTGGCTAG CCGGATGAAA ATCTCACCGG GCCGTTTGAT GATGCCACTG AGTTTTGCCG GTTTAATCAG CGGCATGATG ACTCTGGTAG CAACCCCGCC CAATATGGTG GTCAACAGTG AATTAGTACG CGAAGGGATC AAAGGGTTCG GTTTCTTCGG CGTGACACCA ATTGGCATTA TCATTTTGTT CATGGGCGTG GCTTACATGT TAGTTGCCCG GCGCTGGCTG GGGGGCAAAC AAGAGCACAC TGAGAAAGAT CAATGGAAGC GGCGTACCTT CCGTGATCTG ATTCGCGATT ATAAGCTGAC CGGTCGTGCC CGTCGTCTGG CTATTCGTCA TGGCTCCCCA TTGATTGGTC GTTCACTCGA TGAATTGCAT CTGCGCGCCC GTTATGGCGC GAATGTAGTG GGTATTGAAC GGTGGCGGCG TTTTCGTCGG GTGATGGTGA GTGCGACAGG CTCGTCGGAA CTGCGTGAAA ATGATGTGTT GCTGATTGAT ATGTCCGATT GTGATATGGA CTTACGTGAA TTCTGTAGCG AACAGATGCT AGAACCACTG GTGTTACGTG GTGAGTATTT CTCTGAACAA TCCCGCAATG TGGGGATGGC GGAGGTTTCG CTGATCCCGG ATTCAGCACT GTTGGGGAAA AATTTGCGTG AGGTGGCCTT TCGCAGCCGT TATGGTTTGA ACGTGGTGGG GATCCGCCGC AACGGTAAGA CCTTAGAAGG CAAGTTGGTT GATGACAAGT TACAGTTTGG CGATATTTTG CTGGTGATCG GCGATTGGAA ATTGATTCGC CAGTTACAGT TAAAAACCCG CGATTTTATT GTTCTGAACC TGCCCGCAGA AGTTGATGAA GTTGCGCCAG CCATTTCGCA GGCTCCCCAT GCGCTATTCT GCCTGGCGCT CATGGTTGCC ATGATGCTGA CTGACGAAGT CCCGAATGTC ATTGCCGCGC TGGTGGCCTG TCTGTTGATG GGGCAGTTCC GGTGTATCGA TATGGAAAGT GCCTACCGTT CAATCCATTG GCCGAGTTTG ATTCTGATTA TCGGGATGAT GCCTTTCGCC CAGGCATTGC AGAAAACCGG TGGGGTAGAT TTGATTGTTC GCGGACTAAT GGATGTCGCG GGTGGAATGG GGCCAAGGGT GATGCTGCTG TGCTTATTTG TACTGTGTGC GACGATTGGG CTGTTTATCT CTAATACCGC CACCGCCGTA TTAATGGCAC CAATTGCTAT TGCGACCGCC CGTGAGATGG CGCTTTCCCC ATATCCCTTC GCCATGATTA TTGGTATCGC CGCGTCAGCT GCTTTTATGA CGCCAGTATC TTCGCCGGTG AATACATTGG TCTTAGGCCC CGGGGGTTAT AAATTCGGTG ATTTCGTCCG TATGGGGGTG CCGTTTACTG TACTGGTCAT GATCGTCAGT GTGATGGTGG TTCCCTTACT ATTCCCATTC TGA
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Protein sequence | MFHCQSRIFS FTFCFANEAI LNSELLWVLT LLLIAIVLFT TNKLRMDVVA LLVIIAFVMS GTLSLSEATS GFSDPNVILI AALFVIGEGL VRTGVAYQMG DWLVKVAGHS ETKMLALLMV TVAGLGAFMS STGVVAIFIP VVLSVASRMK ISPGRLMMPL SFAGLISGMM TLVATPPNMV VNSELVREGI KGFGFFGVTP IGIIILFMGV AYMLVARRWL GGKQEHTEKD QWKRRTFRDL IRDYKLTGRA RRLAIRHGSP LIGRSLDELH LRARYGANVV GIERWRRFRR VMVSATGSSE LRENDVLLID MSDCDMDLRE FCSEQMLEPL VLRGEYFSEQ SRNVGMAEVS LIPDSALLGK NLREVAFRSR YGLNVVGIRR NGKTLEGKLV DDKLQFGDIL LVIGDWKLIR QLQLKTRDFI VLNLPAEVDE VAPAISQAPH ALFCLALMVA MMLTDEVPNV IAALVACLLM GQFRCIDMES AYRSIHWPSL ILIIGMMPFA QALQKTGGVD LIVRGLMDVA GGMGPRVMLL CLFVLCATIG LFISNTATAV LMAPIAIATA REMALSPYPF AMIIGIAASA AFMTPVSSPV NTLVLGPGGY KFGDFVRMGV PFTVLVMIVS VMVVPLLFPF
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