| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A1726 |
|---|
| Symbol | csy |
|---|
| ID | 5800197 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | - |
|---|
| Start bp | 1777256 |
|---|
| End bp | 1778602 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641339665 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001606220 |
|---|
| Protein GI | 162418648 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02564] CRISPR-associated protein, Csy1 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00000134865 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.000530278 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGACG AAGGATTAGC GGCGTTTATT GTCTCTTATA TCAAAAGCCG CGAGCAGCCA
AAGCTTGAGG CTTTTGATAA AGAGGCAGAG AAAAGGCTGG CAGGGCTAAC TCAGGCGGAA
GATATTGCAC TGGCCCAGCA AGAGATTGCC CAACAACGGC AGGAGTTGAT AGCCCGTTAT
GAGGTGCGCA ATTGGTTAAC CGATGCGGCT AACCGTGCCG GGCAAATAAA GTTAGCAACT
CATGCACCTA AATACACTCA TAGTGATTCA AAAAGTAGTG GTATTTTGAA TATTGAGTTA
CAAAGTAAGA AAAAGGATTA TTTCTCCAGC GTAGACCTCG CTGAACAAGC CAGTGATGTT
ATTGGTAATG CAGCCGTATT TGATCTTGTA AAGCTATTGC AGAGTGAATG TGAAGGCGGC
TCATTAATAA AGTGTTTAGA GCAAGGTGAT AATTCAGTAC TGAAACTATT CTCAAATGAT
GACGAGTTAG TTGAAGAGTG GACTACAAAA TTTAAAAGCA TTTTGAATAA TGAGAAATTC
ACGTCACATA AACTGGCCAA GCAATTTTAT TTCCCTGTGG GGCCAGATCA ATACCACTTG
TTAAGTCCAC TTTTCTCCTC ATCATTGGCG CAGGCCATGC ATCAACGTAT TATTGAAGCC
CGTTTCAGTG ACCAATCGAA AGAGGCCAAG GCTGCCCATA AAGCAGGGCG ATGGCATCCT
ACGGTCAGGG TCTTGTACCT TGATACGGCG GTGCAACATA TTGGTGGTAC CAAACCCCAA
AATATCTCTT ACCTAAACAG CGTCCGTGGC GGAAAAGTTT GGTTGCTGCC CTGTGGCGCA
CCGTCTTGGA AAAATATTCA GAAACCGCCA ATAAAATATA GATCTATTTT TCATGATCGC
AGTGAATTTA CTGTACTGGC CCGCAATAAC CTGTGGCAAA TGCAGCTATA TTTGCTGGGT
GTCAAACCCC TGAGAAATAC GATGGACATC CGCGCCGCTC GTTTGGCCTG CTGCGATGAA
ATCATTGATA TTCTGTTTAA TTATGTGGCT GAAATTCAAA ATCTGGACGG TACCAATGGC
TGGAGTGACG CTGAAGATTG TAAGTTAAAA CGCTCAGAGC AGCTTTGGCT TGACCCGACC
CGTGCTATGG ATGACCCCGT ATTTAAGCTC GAACGTGAGA AGGAGGATTG GAAACAAGAG
GTCAGCCAAG ACTTCGGTTA CTGGTTAAAT CGTTGGTTAC AGCATGATGA ACTGGTCTTT
GGCTATGTTG AACAGCGGGA GTGGTCAAGC TTATTTAAGC AGCGGCTACG TGAATTTGAA
CAAGGTAGCC TGGAGACATC GTCATGA
|
|---|
| Protein sequence | MSDEGLAAFI VSYIKSREQP KLEAFDKEAE KRLAGLTQAE DIALAQQEIA QQRQELIARY
EVRNWLTDAA NRAGQIKLAT HAPKYTHSDS KSSGILNIEL QSKKKDYFSS VDLAEQASDV
IGNAAVFDLV KLLQSECEGG SLIKCLEQGD NSVLKLFSND DELVEEWTTK FKSILNNEKF
TSHKLAKQFY FPVGPDQYHL LSPLFSSSLA QAMHQRIIEA RFSDQSKEAK AAHKAGRWHP
TVRVLYLDTA VQHIGGTKPQ NISYLNSVRG GKVWLLPCGA PSWKNIQKPP IKYRSIFHDR
SEFTVLARNN LWQMQLYLLG VKPLRNTMDI RAARLACCDE IIDILFNYVA EIQNLDGTNG
WSDAEDCKLK RSEQLWLDPT RAMDDPVFKL EREKEDWKQE VSQDFGYWLN RWLQHDELVF
GYVEQREWSS LFKQRLREFE QGSLETSS
|
|---|
| |