Gene YpAngola_A1688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A1688 
Symbol 
ID5800159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp1740256 
End bp1740885 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content49% 
IMG OID641339628 
ProductLuxR family DNA-binding response regulator 
Protein accessionYP_001606184 
Protein GI162418347 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000202542 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.0533619 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAATG TTGCATTGAT TGACGACCAT ATTGTCGTCC GTTCTGGTTT TGCTCAATTA 
CTGTCACTGG AAGAAGATAT ACGTATTATT GGCGAATACG GTTGTGCGGC CGAGGCATGG
GAAAATCTGC CCAAAACGGA TGTACATGTG GCGGTAATAG ATATTTCAAT GCCGGATGAG
AGTGGGCTAA GCCTGCTCAA GCGCCTGCGC CAACAGATAC CGCATTTTCG CGCCATTATT
CTGAGTATTT ATGACACAAC CGCCTTTGTG CAGAGTGCAA TGGACGCCGG AGCCAGTGGC
TACCTGACCA AACGCTGTGA TCCAGCGGCA TTGGTACAGG CACTGCGCAC CGTCAATGGC
GGCGGCCTTT ATCTGTGTAC CGATGCGCTA CGGGCGCTAC GCCAAATGCC TCAACAGCCG
AGTAAGCTGA CAATTTTAAC TCCGCGAGAA AAAGAGATTT TTCAATTATT GGTCAAAGGG
ATAAGTGTAA AAGCCCTTGC CGAACAGTTG TCGCTCAGCC ATAAAACCGT TCATGTCCAT
CGGGCCAATA TTCTGAGTAA ACTCAATTGT GAAACCACCA TTGAACTGGT GCACTTCGCA
CTACAGCATC AGCTACTGGC GGGTAACTGA
 
Protein sequence
MINVALIDDH IVVRSGFAQL LSLEEDIRII GEYGCAAEAW ENLPKTDVHV AVIDISMPDE 
SGLSLLKRLR QQIPHFRAII LSIYDTTAFV QSAMDAGASG YLTKRCDPAA LVQALRTVNG
GGLYLCTDAL RALRQMPQQP SKLTILTPRE KEIFQLLVKG ISVKALAEQL SLSHKTVHVH
RANILSKLNC ETTIELVHFA LQHQLLAGN