Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A1688 |
Symbol | |
ID | 5800159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 1740256 |
End bp | 1740885 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641339628 |
Product | LuxR family DNA-binding response regulator |
Protein accession | YP_001606184 |
Protein GI | 162418347 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000000202542 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.0533619 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTAATG TTGCATTGAT TGACGACCAT ATTGTCGTCC GTTCTGGTTT TGCTCAATTA CTGTCACTGG AAGAAGATAT ACGTATTATT GGCGAATACG GTTGTGCGGC CGAGGCATGG GAAAATCTGC CCAAAACGGA TGTACATGTG GCGGTAATAG ATATTTCAAT GCCGGATGAG AGTGGGCTAA GCCTGCTCAA GCGCCTGCGC CAACAGATAC CGCATTTTCG CGCCATTATT CTGAGTATTT ATGACACAAC CGCCTTTGTG CAGAGTGCAA TGGACGCCGG AGCCAGTGGC TACCTGACCA AACGCTGTGA TCCAGCGGCA TTGGTACAGG CACTGCGCAC CGTCAATGGC GGCGGCCTTT ATCTGTGTAC CGATGCGCTA CGGGCGCTAC GCCAAATGCC TCAACAGCCG AGTAAGCTGA CAATTTTAAC TCCGCGAGAA AAAGAGATTT TTCAATTATT GGTCAAAGGG ATAAGTGTAA AAGCCCTTGC CGAACAGTTG TCGCTCAGCC ATAAAACCGT TCATGTCCAT CGGGCCAATA TTCTGAGTAA ACTCAATTGT GAAACCACCA TTGAACTGGT GCACTTCGCA CTACAGCATC AGCTACTGGC GGGTAACTGA
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Protein sequence | MINVALIDDH IVVRSGFAQL LSLEEDIRII GEYGCAAEAW ENLPKTDVHV AVIDISMPDE SGLSLLKRLR QQIPHFRAII LSIYDTTAFV QSAMDAGASG YLTKRCDPAA LVQALRTVNG GGLYLCTDAL RALRQMPQQP SKLTILTPRE KEIFQLLVKG ISVKALAEQL SLSHKTVHVH RANILSKLNC ETTIELVHFA LQHQLLAGN
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