| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A1680 |
|---|
| Symbol | lacY |
|---|
| ID | 5800151 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | + |
|---|
| Start bp | 1731922 |
|---|
| End bp | 1733229 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641339620 |
|---|
| Product | galactoside permease |
|---|
| Protein accession | YP_001606176 |
|---|
| Protein GI | 162419492 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2223] Nitrate/nitrite transporter |
|---|
| TIGRFAM ID | [TIGR00882] oligosaccharide:H+ symporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.000567267 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.141313 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAAG CAAACGCAGT ACAATCCTAT TTAAGAAATA ATAACTTCTG GTTGTTCGGG
TTATTTTTCT TCTTCTACTT TTTTATCATG GCATCGTACT ACCCGTTCTT TCCGATCTGG
CTGCATGATA TTAATAACCT GAGCAAAACA GACACCGGTA TTGTATTCGG TAGCATTTCA
CTTTTTGCCC TCGCCTTTCA GCCAATTATG GGGCCGCTCT CTGACAAGCT TGGATTACGC
AAAACCCTAA TGTGGATCAT TGTTGGATTA CTGGTCCTGT TTGCCCCGTT CTTTATTTAT
GTTTTCAGCC CATTACTGAA ATATAACATC TTCATTGGCG CTATTGTGGG TGGCTGCTAT
TTGGGCTTTG TATTTACTGG CGGTTCCCAT GCCATTGAAG CCTATATTGA AAAGGTCAGT
CGCCACAGTA ATTTTGAATA CGGCCGGGTA AGAATGTTCG GCTGTATTGG CTGGGCACTG
TGCGCCACCG TGGTTGGAAT ACTCTACACC GTCAACAACC AATTAATTTT TTGGATGGCA
TCAGGCTGCG CCTTAATACT GGCTGTCTTG CTGTTCTTCG CTCGCCCCGA CCGACAATCT
ACGGCCTTTG TTGTCGATAC TCTAGGCGCG AATAAAGCGG TATTTAACTT AAAGAACGCG
CTGGCACTCC TCCGGAAACG GGAGTTGTGG TTTTTCGTTA TGTATATTGT TGGCGTCGCC
TGTATTTATG ATGTGTTTGA TCAGCAATTT GCTAACTTTT TCACTTCATT CTTTGCCACC
AAACAACAAG GAACTGAAAT ATTCGGTTTT GTCACTACCG GTGGTGAAAT TCTGAATGCA
ACCGTGATGT TTTTCGCTCC GGTAATTATT GCGCGTATTG GTAGCAAAAA TGCGTTATTG
CTGGCAGGTA CCATTATGTC AGTCCGTATT TTAGGTTCAG CATTTGCCAC GACAGCGACC
CAAGTGGTGT TCCTGAAAAT GTTGCATATG TTTGAGGTTC CTTTCTTACT GGTAGGCTCC
TTTAAATATA TTACTCAAGT ATTTGAAGTT CGTTTTTCAG CAACGGTGTA TCTGATTGGG
TTCTGTTTCA GCAAACAGTT ATCCATGATG TTTATGTCAG TATTTGCTGG CCGCATGTAT
GACAGCATGG GATATCAAGA CACGTACATG GTATTAGGCG TTATCGTCCT GTCATTTACC
CTCATTTCAG CTTTCACGCT CTCTGGGCGC AGCGCGGTAG CAAACCTGGC GTCAAGGCTA
AAAGAGGATC CGTCGGTTAC CCCTCCAGTT TCTCAGCCAC AATCTTAA
|
|---|
| Protein sequence | MSKANAVQSY LRNNNFWLFG LFFFFYFFIM ASYYPFFPIW LHDINNLSKT DTGIVFGSIS
LFALAFQPIM GPLSDKLGLR KTLMWIIVGL LVLFAPFFIY VFSPLLKYNI FIGAIVGGCY
LGFVFTGGSH AIEAYIEKVS RHSNFEYGRV RMFGCIGWAL CATVVGILYT VNNQLIFWMA
SGCALILAVL LFFARPDRQS TAFVVDTLGA NKAVFNLKNA LALLRKRELW FFVMYIVGVA
CIYDVFDQQF ANFFTSFFAT KQQGTEIFGF VTTGGEILNA TVMFFAPVII ARIGSKNALL
LAGTIMSVRI LGSAFATTAT QVVFLKMLHM FEVPFLLVGS FKYITQVFEV RFSATVYLIG
FCFSKQLSMM FMSVFAGRMY DSMGYQDTYM VLGVIVLSFT LISAFTLSGR SAVANLASRL
KEDPSVTPPV SQPQS
|
|---|
| |