| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A1607 |
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| Symbol | cydD |
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| ID | 5800076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010159 |
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| Strand | - |
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| Start bp | 1656506 |
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| End bp | 1658248 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641339552 |
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| Product | cysteine/glutathione ABC transporter membrane/ATP-binding component |
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| Protein accession | YP_001606111 |
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| Protein GI | 162421524 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components |
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| TIGRFAM ID | [TIGR02857] thiol reductant ABC exporter, CydD subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.476421 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATTCGTT GGCTGAAAAA ACAAAGCGCC CCCGCGCAAC GTTGGCTCCG CCTATCCATG
TTACTCGGCC TGCTTAGTGG GCTATTGATT ATCGCTCAGG CATGGTTGTT AGCCACCCTG
CTGCAATCTC TCATTATCGA CAAATTACCC CGTGCGACAC TGACCACCGA GTTCTCCCTG
CTGGCAGGCG CATTTGCCTT GCGTGCGGTG ATCAGTTGGC TGCGTGAGCG GGTGGGGTTT
ATTTGTGGTA TGCGTGTGCG CCAGCAGATC CGCAAAGTGG TGTTAGACCG GCTAGAACAG
TTGGGGCCAT CGTGGGTAAA AGGTAAACCT GCCGGGAGTT GGGCAACAAT AATTCTGGAA
CAAATTGAAG ATATGCAGGA GTACTACTCA CGCTATCTAC CACAAATGTA TCTGGCAGTA
TTTATCCCGG TCCTGATCTT AATTGCTGTC TTCCCCATCA ATTGGGCCGC GGGCTTGATC
TTGTTTGTCA CCGCCCCCCT GATCCCCATA TTCATGATAT TGGTCGGGAT GGGAGCCGCA
GATGCTAACC GGCGTAATTT TGTCGCATTG GCAAGATTGA GCGGTAACTT CCTTGACCGC
TTGCGTGGGC TGGATACGCT ACGTTTGTTT AACCGCGCCA AAGCAGAAAC CGACCAAATC
CGTGACTCTT CGGAGGATTT TCGCAGCCGA ACCATGGAAG TGCTGCGTAT GGCCTTCCTC
TCTTCTGCTG TATTGGAATT TTTTGCCGCC ATCTCCATTG CCGTAGTTGC CGTCTATTTT
GGTTTTTCCT ATTTAGGGGA ACTGAATTTT GGTAGCTATG GCCTCGGCGT AACGCTGTTT
GCCGGTTTTT TGGTGCTAAT ACTGGCGCCT GAATTCTTCC AACCCCTTCG AGACTTAGGG
ACGTTCTATC ACGCGAAAGC ACAAGCTGTC GGTGCGGCTG AATCGTTAGT GACGTTTTTA
AGCAGCGAGG GAGAAGCCAT TGGTCAAGGC GAGAAACAAC TAGACGGTAA AGAGGCCATC
GCCCTTGAGG CGAATGAGCT GGAAATCCTG GCACCCAATG GTACCCGTTT AGCCGGGCCA
CTTAATTTCT CACTGCCAGC AGGCAAACGG GTTGCCATTG TGGGTCAGAG CGGCGCGGGG
AAAAGTTCGT TGCTCAATCT CTTGTTGGGT TTTTTGCCTT ATCGCGGATC GCTAAAAGTT
AACGGTATCG AATTACGTGA ACTGGAACCC CAAGTCTGGC GTAGTCAGTT AAGTTGGGTA
GGCCAAAATC CACATCTACC GGAACAAACG CTGGCCACCA ATATTTTACT GAGGCAACCG
GATGCAAGTG AGCACCAACT GCAACAGGCG GTGGAGCGGG CTTATATCAA TGAATTTTTG
AAGGATTTAC CTCAAGGGCT GAATACTGAA ATTGGCGATC ATTCGGCACG TCTTTCGGTT
GGGCAAGCTC AACGAATTGC CGTCGCCAGA GCATTATTAA ACCCATGTCG TTTATTGTTG
TTGGATGAGC CTACCGCCAG TCTTGATGCC CACAGTGAGC AGTTGGTGAT GAAAGCGCTG
GAGGAGGCCT CCCGTGCGCA GTCTACCCTG CTGGTCACTC ATCAGTTGGA GGACACCCTA
GGTTATGATC AAATCTGGGT AATGGATAAT GGCCGTCTAA TTCAACAAGG TGATTACTCC
CCCCTTAGCC AGTCTGCTGG TTCATTTGCC AATCTGCTGT CTCAGCGCAA TGAGGAGCTT
TAA
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| Protein sequence | MIRWLKKQSA PAQRWLRLSM LLGLLSGLLI IAQAWLLATL LQSLIIDKLP RATLTTEFSL
LAGAFALRAV ISWLRERVGF ICGMRVRQQI RKVVLDRLEQ LGPSWVKGKP AGSWATIILE
QIEDMQEYYS RYLPQMYLAV FIPVLILIAV FPINWAAGLI LFVTAPLIPI FMILVGMGAA
DANRRNFVAL ARLSGNFLDR LRGLDTLRLF NRAKAETDQI RDSSEDFRSR TMEVLRMAFL
SSAVLEFFAA ISIAVVAVYF GFSYLGELNF GSYGLGVTLF AGFLVLILAP EFFQPLRDLG
TFYHAKAQAV GAAESLVTFL SSEGEAIGQG EKQLDGKEAI ALEANELEIL APNGTRLAGP
LNFSLPAGKR VAIVGQSGAG KSSLLNLLLG FLPYRGSLKV NGIELRELEP QVWRSQLSWV
GQNPHLPEQT LATNILLRQP DASEHQLQQA VERAYINEFL KDLPQGLNTE IGDHSARLSV
GQAQRIAVAR ALLNPCRLLL LDEPTASLDA HSEQLVMKAL EEASRAQSTL LVTHQLEDTL
GYDQIWVMDN GRLIQQGDYS PLSQSAGSFA NLLSQRNEEL
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