Gene YpAngola_A1533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A1533 
Symbol 
ID5800001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp1583962 
End bp1585050 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content51% 
IMG OID641339482 
Producthypothetical protein 
Protein accessionYP_001606042 
Protein GI162421146 
COG category[S] Function unknown 
COG ID[COG2855] Predicted membrane protein 
TIGRFAM ID[TIGR00698] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.212301 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.210583 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACTT CTCAGACAAA AGAACTCCCC CGCCCTCAGC TGTTTACTGT GATGACCCGC 
TATATTCCGG GTTTGGTGTT AACGGGTGTG ATTACGGGTT TAGCCCTTAA TGTGGGCGAT
ATGCCGTGGT TTATCAATAT GGGGCTGGGG GCGCTGACCC TGGCTATTCT CTTCGGCATT
ATCGTGGGAA ATACGCTGTA CCCATGGCTA CAGCCGGTCT GTTCAGATGG TGTGGTCTAT
GCCAAACAGT ATTTACTGCG GCTAGGGATC ATTTTGTACG GTTTCCGCCT GACCTTTCAG
CAAGTGGCTG ATGTCGGGGC GACCGGTATG GTGATCGATT TATTGACCCT AAGTTCCACC
TTTATATTGG CATGTTGGTT GGGCAAGCGG GTATTTGGTC TGGATCAGCA AACAGTGATG
TTGATCGGGG CCGGTAGTAG CATCTGTGGT GCCGCCGCCA TTATGGCGAC TGAACCCGTA
TTGAAAGCGG ATGCCAGTAA AGTGGCGGTT GCTGTTGCCA CCGTGGTCAT TTTCGGTACG
CTGGCTATTT TTGTTTACCC TTGGTTGTAT CAGCTAAACC TGCATTATCA ATGGTTGCCT
TTCAGCCAGG AGACATTTGG TATTTTTGCC GGTTCGACCA TTCATGAAGT GGCTCAGGTC
GTCGCTGCCG GACATGCCAT TGGCCCTGAT GCTGAAAATG CGGCGGTGAT CACCAAGATG
ATCCGCGTGA TGATGCTGGC ACCGTTCCTG CTGCTACTTT CCGCCTATCT GGGCCGTAGC
CGCATAAAAA CAAGCGGTGA AAAACGCGAG AAAAGCGCTA TCACCATCCC GTGGTTTGCG
GTGATCTTCA TTCTGATGGC GGGTTTTAAC TCACTGAATC TGTTGCCTGC GGTCTGGGTT
AATCATCTGA TTACGCTGGA TACCATTCTG TTGGCCATGG CAATGGCAGC GCTGGGATTA
ACCACGCACA TTGGTTCCAT CCGTCAAGCC GGGGTGAAAC CACTGTTACT GGCCCTATTG
CTGTTCATCT GGTTATTGGT CGGTGGCACC GGTATCAACT TATTTGTGCA ACATATTGCA
CTTGTGTAA
 
Protein sequence
MATSQTKELP RPQLFTVMTR YIPGLVLTGV ITGLALNVGD MPWFINMGLG ALTLAILFGI 
IVGNTLYPWL QPVCSDGVVY AKQYLLRLGI ILYGFRLTFQ QVADVGATGM VIDLLTLSST
FILACWLGKR VFGLDQQTVM LIGAGSSICG AAAIMATEPV LKADASKVAV AVATVVIFGT
LAIFVYPWLY QLNLHYQWLP FSQETFGIFA GSTIHEVAQV VAAGHAIGPD AENAAVITKM
IRVMMLAPFL LLLSAYLGRS RIKTSGEKRE KSAITIPWFA VIFILMAGFN SLNLLPAVWV
NHLITLDTIL LAMAMAALGL TTHIGSIRQA GVKPLLLALL LFIWLLVGGT GINLFVQHIA
LV