| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A1456 |
|---|
| Symbol | |
|---|
| ID | 5799924 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | - |
|---|
| Start bp | 1509959 |
|---|
| End bp | 1510681 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641339411 |
|---|
| Product | phage repressor protein |
|---|
| Protein accession | YP_001605972 |
|---|
| Protein GI | 162419046 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.817013 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 0.84573 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGA AGCCATTAAC GCCCGAACAG TTAGATGACG CTAAGCGGCT GAAAGAGCTG
TTTAATGCGA AGAAAAAAGC ACTGGGTATA TCCCAGGAAT CTGTTGCACA TGAATTGGGC
GTCGGCCAAA GTGCCGTCAA CCAGTTCCTC AACGGCGTAA ACCCGCTCAA TATCACCAAC
GCGGCTGCTT TTGCAAAAGT ACTGAATGAA CCCATCAGTA GCTTTAGCCC TTCTCTGGCC
AAAGAGTTGG CAAAAATGGC GGAGAGCCTG TCCATCACTA CCCGCTCAGG TGCAAAGGAT
AAACCCGCGG TTTCCGTCGC TAATAGCTAT CCGTTAATCA GTTGGATAAG CGCGGGTAAC
TGGTATGAAG CGATAGAGCC GTATACGCTG CGTGACATTG AGATCTGGCC TGAATCGACC
AAGCATGCCC ATGAGAGTGC ATTTTGGTTG AGTGTAAAAG GCGATTCCAT GACCTCGCCA
TCAGGTATCA GCTTCCCAGA AGGGATGATT ATCCTGGTTG ACCCAGAAAA AGAGCCCATG
CCGGGTAATT TTGTGATCGC CAAACTGACG GATGATAACG AAGCAACATT TAAGAAGTTA
GTGGTTGATG CGGGCATTAA GTACTTGAAA CCCTTGAATC CCGCGTATCG GTTAATTGAA
CTGAACGGTA ACTGTAAGAT ACTCGGTGTG GTTGTTGATG CCCGTTGGTT GCAAATAGAT
TAG
|
|---|
| Protein sequence | MKKKPLTPEQ LDDAKRLKEL FNAKKKALGI SQESVAHELG VGQSAVNQFL NGVNPLNITN
AAAFAKVLNE PISSFSPSLA KELAKMAESL SITTRSGAKD KPAVSVANSY PLISWISAGN
WYEAIEPYTL RDIEIWPEST KHAHESAFWL SVKGDSMTSP SGISFPEGMI ILVDPEKEPM
PGNFVIAKLT DDNEATFKKL VVDAGIKYLK PLNPAYRLIE LNGNCKILGV VVDARWLQID
|
|---|
| |