Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A1394 |
Symbol | tolQ |
ID | 5799861 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 1452527 |
End bp | 1453213 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641339352 |
Product | colicin uptake protein TolQ |
Protein accession | YP_001605919 |
Protein GI | 162420513 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0811] Biopolymer transport proteins |
TIGRFAM ID | [TIGR02796] TolQ protein |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00123539 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTGACA TGAACATTCT GGATTTATTC CTGCAGGCAA GCCTATTCGT TAAGCTTATC ATGCTGGTTC TGATGGGCTT TTCTATTGCG TCATGGGCTA TCATCATTCA ACGAACGCGA ATTCTGAATG CGGCTACCCG CGATGCTGAA GCCTTCGAAG ATAAGTTTTG GTCCGGCATT GAGCTTTCTC GCTTGTATCA GGAAAGTCAG GCTCGTCGCG ATACACTTAG CGGCTCAGAG CAGATCTTCC ATTCTGGTTT CAAAGAGTTT GCCCGTCTAC ATCGTGCAAA CAGCCATGCA CCAGAAGCGG TGATTGACGG TGCTTCCCGT GCGATGCGCA TTTCAATGAA CCGCGAGTTA GAAGCGTTGG AAACTCATAT TCCGTTCCTC GGTACTGTCG GTTCAATCAG CCCGTATATC GGTCTGTTTG GTACCGTATG GGGGATTATG CATGCCTTTA TCTCTCTGGG CGCCGTCAAA CAGGCGACAT TACAGATGGT AGCACCGGGT ATTGCAGAAG CCCTGATTGC GACAGCGATC GGCCTGTTTG CTGCTATTCC TGCTGTTATG GCCTATAACC GTCTGAATCA GCATGTGAAT AAGCTTGAAC AAAACTATGA CAACTTCATG GAAGAGTTCA TTGCTATTCT GCATCGCCAG GCTTTCGCCA GCACCGAAAG CAAATAA
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Protein sequence | MADMNILDLF LQASLFVKLI MLVLMGFSIA SWAIIIQRTR ILNAATRDAE AFEDKFWSGI ELSRLYQESQ ARRDTLSGSE QIFHSGFKEF ARLHRANSHA PEAVIDGASR AMRISMNREL EALETHIPFL GTVGSISPYI GLFGTVWGIM HAFISLGAVK QATLQMVAPG IAEALIATAI GLFAAIPAVM AYNRLNQHVN KLEQNYDNFM EEFIAILHRQ AFASTESK
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