Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A1356 |
Symbol | |
ID | 5799822 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 1416649 |
End bp | 1417578 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 641339317 |
Product | hypothetical protein |
Protein accession | YP_001605885 |
Protein GI | 162420906 |
COG category | [S] Function unknown |
COG ID | [COG3595] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0213142 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.000111043 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCCACAAG TTAATAACAT ATCGACAAAC AATATACACT CAGCCGGCTT TAACAACTCA AATTCAATTC AAAAATATAC TGGAGCAGTC TCATCTATAA GTGATGATTT ACGTATTAAT AATGAAAAGT GCAAGAGTGA CATAGGAACT ATAAGTGGTG ATATAAAAAT TAATCGCCAT TCTGCAGTCT ACGGTAATGT GAATTCAGTC AGTGGCGATA TTACTGTAAA AAATTCTATA GTAGATAAAG ACATCACCAC AGTAAGTGGT GATGTTAACG CGGTGAATTC GACTATAGGA AAAAATATAA AAACAGTCAG TGGTTCGATT GAGGTGGAAC AATCAACTGT AAGCGGCAAT TTGGAAACAA CAAGTGGTGG GATAGATATA GATACAACAA AAATTAACGG TAATGTGCAT ACGACAAGTG GTTCAATTTC GATGAACGAT TCAACTATTG ATGGTAGCGT AACATGTAAG GCGGGGTCTG TAACAATTGT CAATTCAACA ATTAAAGAAA GCCTTAATGT AACCAGTGAG AAAATAATTG TTGGTACAGC ATCTTGTATT GGAAAAATTA ACATTTCCCC CCCTGAATCT GTAAATTTTA ACATCATGAA TTTTGGGAAC GATAGTATAG TGATGGGAAT GAGGAATTTT TGTATTTCAG GAGAGGTAAA TTTTACCATT ACTAATGGTA AAGTATTTGT TAATGAACAA AGGGTCGGCC ATACAGCTTC GCAATCAACT TCGAAAAAAG TAGAAGAAGT TACTATTAAT ATCGCGAAAA ATGCCAGTGT TAATGATATT GTTTTTTATA CTAAAAAGTG CCATATCATT TTAGAAGGAA ATGCTAAATA TAACGGAGAA AAAAAGGATG GCATGCAATT CACCCATGTT AACGCACCGA AAAGTCATGC TTATGCGTAA
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Protein sequence | MPQVNNISTN NIHSAGFNNS NSIQKYTGAV SSISDDLRIN NEKCKSDIGT ISGDIKINRH SAVYGNVNSV SGDITVKNSI VDKDITTVSG DVNAVNSTIG KNIKTVSGSI EVEQSTVSGN LETTSGGIDI DTTKINGNVH TTSGSISMND STIDGSVTCK AGSVTIVNST IKESLNVTSE KIIVGTASCI GKINISPPES VNFNIMNFGN DSIVMGMRNF CISGEVNFTI TNGKVFVNEQ RVGHTASQST SKKVEEVTIN IAKNASVNDI VFYTKKCHII LEGNAKYNGE KKDGMQFTHV NAPKSHAYA
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