Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A1251 |
Symbol | gmd |
ID | 5799716 |
Type | |
Is gene spliced | No |
Is pseudo gene | Yes |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 1306312 |
End bp | 1306830 |
Gene Length | 519 bp |
Protein Length | |
Translation table | |
GC content | 42% |
IMG OID | 641515385 |
Product | |
Protein accession | |
Protein GI | |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1089] GDP-D-mannose dehydratase |
TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000000285562 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0000000000000757963 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACTAAGA TTGCGCTCAT TACTGGTATT ACAGGACAAG ATGGCTCTTA TTTGGCCGAG TTTTTATTAG AAAAGGGTTA TGAGGTTCAT GGTATTAAGC GCCGAGCTTC ATCTTTTAAT ACCAGCCGCA TTGATCATAT TTATCAAGAT CGCCATGAGA CGAATCCACG CTTCTTTTTA CATTATGGTG ACTTGACTGA CACGTCGAAT TTAATTCGTT TGGTCCAGGA AATTCAGCCT GATGAGATTT ATAATTTGGG TGCACAATCT CATGTGGCTG TTTCATTCGA ATCACCGGAA TATACTGCCG ATGTTGATGC CATGGGGACA CTGCGCTTGC TAGAGGCCAT TCGTATCAAT GGGCTTGAAA AGAAGACTCG TTTCTATCAA GCCTCAACCT CAGAGCTTTA TGGTTTAGTG CAGGAAACGC CTCAGCGTGA AACAACGCCA TTCTATCCGC GTTCTCCTTT ATGCTGTTGC CAAAATGTAT GCTTACTGGA TTACAGTAAA TTACCGTGA
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Protein sequence | |
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