Gene YpAngola_A1240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A1240 
Symbol 
ID5799705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp1293141 
End bp1294457 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content48% 
IMG OID641339211 
Producthypothetical protein 
Protein accessionYP_001605781 
Protein GI162419795 
COG category[V] Defense mechanisms 
COG ID[COG4268] McrBC 5-methylcytosine restriction system component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0689849 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.000177876 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGTCTC GTAAGGACTT TACCGTCTTC GAATATGGTC ACCTGATTAG CGACAAAGAC 
AGTGGCCGCA TAAATAATGC GGTCTCGCTG CCTCCGCAGC TGTTTGAGTG GCTTGAGCAA
CGTTGCCTGA AAGATGACGC GGATAACACT CACCGTCTGC TCACCCTTGG AAGTCGGGGG
GGCGTAAAAA CGCTGCAGGT AAAAAACTAT GCTGGTGTTA TCTCTCTTCC GGGGAATGCG
TTTATTGAAG TGTTGCCAAA AACGGGGCGG CGTGATGAGA ACATTGATAT TGCACGTCAG
CAGCTTTTGA TGATGCTACG CACGCTAAAA TCATTTCGCC ATATAGCCAC TTCAGCATCC
AGAGTTCGAA CCTCGAAGAT GCCGCTGATG GATGTTTTTA TTCAGCAGTT TATCGATAGC
GTACAGCAGA TTGTGCGCCA GGGGCTAAAG CGTGACTATT TACGCCAGCA GGACAATCTG
CCTTGGATGA AAGGGAAGTT ACGGGTCTCA GCTCAAATAA GCAAAAACTG TGTGCATCGG
GATCGCTTTC AGGTGGAGTT TGACGATTAT AGCTCTGAAC GTCCGGAGAA CCGGATACTG
AAAACCGCCA TCGATAAAAT TCGCCGTCAG ATCAGCAACC CACAGCTACT ACTACAAGTT
AACTCTTTGC AGGTGCACTT TGACGACATT ACGCCTGTCG GTGATGTTCG CATCGCCTTC
GACCAGGTAC GTCTTGACCG ACATATGCGT CACTATGAAC TTGCCTTGGC GTGGGCGCGG
CTGATTTTGA TGGGGCAGTC GCCCCACTGC ATGCAGGGCG ACGCCAACGC AATTTCACTG
CTTTTCCCAA TGGAAGCTGT GTTTGAATCT TTTGTGACTG CATGGATGCG TCATCGTTAT
AACGATAACT GGCATGTGAA GGCACAGGTG GATTCACACA CCTTGGTTCG TCTCAATGGC
AAAGGAGTAT TTAAGCTTAG ACCCGATATC CATCTACGAC CTCGTGGGGA GAATGGGGAT
CAGGCGATGA TTTGTGATGT TAAATGGAAA ATGGTGGAGA GCGGAAAGGC GACACTCGAA
CAATCGCAGG CTGACCTCTA CCAGATGCTG GCTTACGGTG TGAACTATCA GGAGGGGATA
GGGGATATGC TGCTGATTTA TCCTTCGCAT GAGGGTTTTA GTCAGCCGTT ACCTTATCCA
TATGAATTCA GCCATCAAAA GGAAAACCCG CTGCGTTTAT GGGTTGTGCC ATTTTTCATT
GGTGACAGTT TGCAAAGTTC TGATCTGCGT TTCCCTGATG GGAAAATATT GATTTAA
 
Protein sequence
MKSRKDFTVF EYGHLISDKD SGRINNAVSL PPQLFEWLEQ RCLKDDADNT HRLLTLGSRG 
GVKTLQVKNY AGVISLPGNA FIEVLPKTGR RDENIDIARQ QLLMMLRTLK SFRHIATSAS
RVRTSKMPLM DVFIQQFIDS VQQIVRQGLK RDYLRQQDNL PWMKGKLRVS AQISKNCVHR
DRFQVEFDDY SSERPENRIL KTAIDKIRRQ ISNPQLLLQV NSLQVHFDDI TPVGDVRIAF
DQVRLDRHMR HYELALAWAR LILMGQSPHC MQGDANAISL LFPMEAVFES FVTAWMRHRY
NDNWHVKAQV DSHTLVRLNG KGVFKLRPDI HLRPRGENGD QAMICDVKWK MVESGKATLE
QSQADLYQML AYGVNYQEGI GDMLLIYPSH EGFSQPLPYP YEFSHQKENP LRLWVVPFFI
GDSLQSSDLR FPDGKILI