Gene YpAngola_A1203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A1203 
SymbolaroQ 
ID5799668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp1252720 
End bp1253172 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content48% 
IMG OID641339174 
Product3-dehydroquinate dehydratase 
Protein accessionYP_001605744 
Protein GI162420832 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0757] 3-dehydroquinate dehydratase II 
TIGRFAM ID[TIGR01088] 3-dehydroquinate dehydratase, type II 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.26523 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.802728 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGATA AGTTTCACAT TTTGCTTCTG AATGGCCCTA ACTTGAATCT GCTTGGAACG 
CGTGAACCAG AAAAGTATGG TTACACCACC TTAGCTGAAA TTGTCAGTCA GTTAGAAATT
CAGGCTCAGG GAATGGATGT CGCGCTTTCC CATTTGCAGT CAAATGCAGA ACATGCGCTG
ATCGATAGCA TTCACCAGGC ACGGGGTAAT ACCGATTTTA TCCTGATTAA CCCAGCAGCG
TTTACGCATA CCAGCGTGGC ACTGCGTGAT GCGTTGCTAG GCGTGCAGAT CCCGTTTATC
GAGATCCACT TGTCTAACGT GCATGCCAGG GAGCCTTTCC GTCATCATTC ATATCTCTCC
GATATCGCGG TTGGCGTAAT CTGCGGACTT GGCGCAGATG GCTACAACTT TGCTTTACAG
GCAGCGGTAA ATCGCTTGTC AAAATCCAAC TAG
 
Protein sequence
MSDKFHILLL NGPNLNLLGT REPEKYGYTT LAEIVSQLEI QAQGMDVALS HLQSNAEHAL 
IDSIHQARGN TDFILINPAA FTHTSVALRD ALLGVQIPFI EIHLSNVHAR EPFRHHSYLS
DIAVGVICGL GADGYNFALQ AAVNRLSKSN