| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A1199 |
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| Symbol | |
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| ID | 5799664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010159 |
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| Strand | - |
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| Start bp | 1247222 |
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| End bp | 1249135 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641339170 |
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| Product | regulatory protein CsrD |
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| Protein accession | YP_001605740 |
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| Protein GI | 162421737 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00499457 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0245438 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATTTA CCACCAAACT TTCTGCGTTT ATGACGCTGC TGGTCGTATT GGCTATGTGT
TTAGTCTTAT TGGGCAGCAC GATCAGCTTC TTCTATTTGT GCCAGAAGAA AATGGAACAA
CGGCTCCAAA GTATTGTGAC CGCTTACGAT CAGTCACTGC TGCTGCAACC CATCAATAAA
AAACGTGAAT GGCTGCCACT GATGATGCAG ACCCTTGGTG TGGTCGATGT CAGTGTCAAA
AATAGCACCA GTACCCTCTA TCAACTCCAC ATTCCTGCAG TTTATACGCC TTGGAACAGC
CACAGTCGCT ACCGTCAGAT GGTATTGCCT CTGTTGCATC AGCCAGGGAC GGAGATGCAT
TTCAACTATA TTGACCCGTT GGGTAGCTAT GCCCGTTCTA TTTATGCCGC GGCCATTTTA
TCACTGGTGG TGGTCATTGC GTTAACGTTG TTGTTGAGTT TCCGCTGGCT ACGTGACCAG
ACCGTGGGGC AGGAAAAACT TGAACGGCGA GCAAGGCGCA TTCTCAATGG TGAACGTGAA
CATGCGGTGC GCAGCGAGGA TTACGAATGG CCACCTTGTG CCAGCAGGGC TATTGACCAT
TTATTATCTG AGTTGATGGA GGTGCGGGCA GAACGCAATC GGGTAGATAC GTTAATCCGC
ACGTTTGCGG CTCAAGATGC TCAGACTGGC CTCAGTAACC GTCAGTTTTT TGATAACCAA
CTGACCACAC AACTTGAAGA GACCGGTGCG CACGGTGTGG TCATGATGGT GCAACTGCCC
GATTTTGAAG CCTTAAATGA AACGCATGAT CAGCAGCAAG TACAGGAATT GATGAGTTCA
CTGGTTAACC TGCTGTCAAC TTTTGTGGCA CGCTACCCCT CAGCACTCTT GGCCCGCTAC
CTTAATAGTG ACATCGCGAT ATTACTGCCC CACAAAACCC TGAAAGATGC CGATGTGATG
GCCGCACAGT TGGTGAATGC GGTGAGAACC TTACCGGAGC CTCATATTAT TGATCGCGAA
TCACTGTTGC ATATTGGCAT CGTGGCTTAC CGGAGTGGTG AGTCAGTCGA ACAAATTATG
GACAATGCCG GGCAGGCGAC CAAAAGTGCG GCGCTGTATG GTGGCAACGG TTGGTATGTG
TTCGACACTC AGGTACCGGA GCGCGGACGT GGCAGTGTTA AATGGCGTAC ATTACTGGAA
CAGACTCTGG CGAGCGGAGG CCCAAGGCTT TATCAAAAAC CCGTTATTAC TGTTGATGGC
AAAATAAGCC ATCGTGAAAT AATTAGCCGC ATATATGATG GTGAGCAGGA GCTACTGGCG
GCCGAGTTTA TGCCCTTGGT ACAATTGCTC GGATTGGGTG AACGTTATGA TCGGCAAAAG
ATTGATAAGA TAATTCCTTT ATTATCTTTA TGGCCGGATG AAACGCTGGC ATTTTCTATC
AGCGTTGATT CATTATTACA TCGTCCTTTC CAGCGCTGGT TGCGTGACAC GCTATTACAG
TGCAAAAAAT CTGACCGAAT GCGAATTATC TTTGAACTTG CAGAGGCAGA TGTGTGTCAA
CATATCGAAG AAATCCGCCA AATGGTCCGT TTATTGCGTG GCGTAGGCTG CAAAGTGATG
GCATCACAGG CTGGATTGAC GGTTGTCAGC ACCTCATATA TTAAGTCTTT GCAGGTTGAA
ATGATAAAGC TTCATCCCGG TGTGGTAAGA AGCATTAATT TTCGCTATGA AAACCAGTTA
TTTGTAGAAA GTCTGACCGG TGCCTGTGCA GGGACGCAGA CGAAAGTTTT TGCGGCAGAA
GTGCGTACCC GTGAAGAATG GCAAACGCTG CAAGAGAAAG GCGTTTACGG CGGACAGGGC
AATTTCTTTG CTCCACCGAC CCCATTAAAC TCCGGAAAGA AAAAATATTC GTAA
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| Protein sequence | MRFTTKLSAF MTLLVVLAMC LVLLGSTISF FYLCQKKMEQ RLQSIVTAYD QSLLLQPINK
KREWLPLMMQ TLGVVDVSVK NSTSTLYQLH IPAVYTPWNS HSRYRQMVLP LLHQPGTEMH
FNYIDPLGSY ARSIYAAAIL SLVVVIALTL LLSFRWLRDQ TVGQEKLERR ARRILNGERE
HAVRSEDYEW PPCASRAIDH LLSELMEVRA ERNRVDTLIR TFAAQDAQTG LSNRQFFDNQ
LTTQLEETGA HGVVMMVQLP DFEALNETHD QQQVQELMSS LVNLLSTFVA RYPSALLARY
LNSDIAILLP HKTLKDADVM AAQLVNAVRT LPEPHIIDRE SLLHIGIVAY RSGESVEQIM
DNAGQATKSA ALYGGNGWYV FDTQVPERGR GSVKWRTLLE QTLASGGPRL YQKPVITVDG
KISHREIISR IYDGEQELLA AEFMPLVQLL GLGERYDRQK IDKIIPLLSL WPDETLAFSI
SVDSLLHRPF QRWLRDTLLQ CKKSDRMRII FELAEADVCQ HIEEIRQMVR LLRGVGCKVM
ASQAGLTVVS TSYIKSLQVE MIKLHPGVVR SINFRYENQL FVESLTGACA GTQTKVFAAE
VRTREEWQTL QEKGVYGGQG NFFAPPTPLN SGKKKYS
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