| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A1197 |
|---|
| Symbol | mreC |
|---|
| ID | 5799662 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | - |
|---|
| Start bp | 1244643 |
|---|
| End bp | 1245638 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641339169 |
|---|
| Product | rod shape-determining protein MreC |
|---|
| Protein accession | YP_001605739 |
|---|
| Protein GI | 162421244 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1792] Cell shape-determining protein |
|---|
| TIGRFAM ID | [TIGR00219] rod shape-determining protein MreC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.000315493 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.00816148 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCGA TTTTTAGTCG GGGTCCATCC CTGCAACTGC GACTCTTCTT TGCCATTATT
GCGGCCATTG TACTGGTTAT TGCTGATAGC CGGTTGGGTA CGTTCGTTAA AATACGGACT
TACATGGACA CCGCAGTTAG CCCTTTCTAT TTTCTGGCCA ATGGGCCACG TAAAATTCTC
GACAACGTTT CTGATACGCT AGCCACTCGC GAACAACTGG AGTTGGAGAA TCGTGCGTTA
CGCCAAGAGC TGTTACTGAA AAATACCGAT CTTCAATTAC TGGGGCAGTT TAAACAGGAA
AACAACCGCT TACGGGAATT ATTGGGTTCT CCTCTGCGTC AGGATGAGCA AAAAATGGTG
ACTCAGGTCA TGTCCAGCGG GACAGACCCT TATAGTGATC ATGTTGTGAT TGATAAAGGC
TCGAACAGCG GCGTTTATGA GGGCCAACCG GTCATTAGTG ATCGCGGTGT CGTCGGCCAG
GTTGTTGCAG TGAGTAAATT TACCAGCCGC GTATTATTGA TTTGCGATGC TTCCCATGCA
CTGCCTATTC AGGTGCTGCG TAATGATATT CGGGTGATTG CTGCCGGTAG CGGGTGTAGC
GATGATTTAT TATTGGAGCA TTTACCCAGT AATACAGATA TTCGTGTAGG CGATGTGCTG
GTAACGTCGG GCTTGGGTGG GCGCTTCCCT GAAGGCTATC CCGTTGCCGT TGTCTCTTCG
GTCAAAGTCG ACAACCAGCG CGCTTATACG GTTATTCAAG CTCGGCCCAC CGCAGATTTA
CAACGCTTAC GTTATTTACT GCTATTGTGG GGCGCTGATC GTAATGGTGA TATGCCAATG
CCACCGGATG AGGTACGCCG GGTCGCCAAT GAACGTCTGG CACCAATGAT GTCTCAGGTG
TTGCCTTCTG CTGATGCTAT GGGGCCGCCT GCGCCTGCCG CATCTACGCC CGCGGGTGCC
ACACCAGGAG TTGTCACACC AGGAGTTTCG CCGTGA
|
|---|
| Protein sequence | MKPIFSRGPS LQLRLFFAII AAIVLVIADS RLGTFVKIRT YMDTAVSPFY FLANGPRKIL
DNVSDTLATR EQLELENRAL RQELLLKNTD LQLLGQFKQE NNRLRELLGS PLRQDEQKMV
TQVMSSGTDP YSDHVVIDKG SNSGVYEGQP VISDRGVVGQ VVAVSKFTSR VLLICDASHA
LPIQVLRNDI RVIAAGSGCS DDLLLEHLPS NTDIRVGDVL VTSGLGGRFP EGYPVAVVSS
VKVDNQRAYT VIQARPTADL QRLRYLLLLW GADRNGDMPM PPDEVRRVAN ERLAPMMSQV
LPSADAMGPP APAASTPAGA TPGVVTPGVS P
|
|---|
| |