Gene YpAngola_A1155 details

Gene Information

• Locus tag: YpAngola_A1155
• Symbol: ptsN
• ID: 5799620
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pestis Angola
• Kingdom: Bacteria
• Replicon accession: NC_010159
• Strand: +
• Start bp: 1193328
• End bp: 1193822
• Gene Length: 495 bp
• Protein Length: 164 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 641339129
• Product: PTS system transporter subunit IIA-like nitrogen-regulatory protein PtsN
• Protein accession: YP_001605699
• Protein GI: 162421096
• COG category: [G] Carbohydrate transport and metabolism; [T] Signal transduction mechanisms
• COG ID: [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)
• TIGRFAM ID: [TIGR01419] PTS IIA-like nitrogen-regulatory protein PtsN

Plasmid Coverage information

• Num covering plasmid clones: 53
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 48
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGAAAGATG AGATGACCAA CGATCCAGCA TTGCAATTAA GCTCGGTACT CAATATCGAG 
AGCACCAAAA GCTCCGTACA CTGCTCAAGT AAAAAACGGG CTTTGGAAAT TATCAGCGAG 
TTAGCTGCCA AGCAGCTTAA TCTACCTTCA CAGGTCGTTT TTGATGCAGT ATTGACCCGT 
GAACGCATGG GTAGCACCGG GATTGGCAGT GGTATCGCAA TACCTCATGG CAAGTTGGAA 
GAGGATACAC TGCGCGCGGT GGGTGTATTT ATTCGTCTGG AACAGCCTAT TGCCTTTGAT 
GCGATTGATA ACCAACCCGT TGACCTGTTG TTTGCCTTGT TGGTTCCAGC AGACCAATGT 
AAAACTCACT TACATACTTT ATCTTTAGTC GCCAAACGAT TAGCTGATAA AACAGTGTGT 
CGCCGCCTGC GGTCAGCACA AAGTGATGAT GAGCTTTATC AGATTATTAC TGAATTACCG 
CCAGAAATAG CCTAG 

 

Protein sequence

MKDEMTNDPA LQLSSVLNIE STKSSVHCSS KKRALEIISE LAAKQLNLPS QVVFDAVLTR 
ERMGSTGIGS GIAIPHGKLE EDTLRAVGVF IRLEQPIAFD AIDNQPVDLL FALLVPADQC 
KTHLHTLSLV AKRLADKTVC RRLRSAQSDD ELYQIITELP PEIA