Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A1153 |
Symbol | rpoN |
ID | 5799618 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 1191478 |
End bp | 1192911 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641339128 |
Product | RNA polymerase factor sigma-54 |
Protein accession | YP_001605698 |
Protein GI | 162418332 |
COG category | [K] Transcription |
COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCAAG GTCTGCAACT CAAGTTCAGC CAACAACTGG CGATGACTCC GCAGCTTCAG CAAGCTATTC GCTTGTTGCA ACTTTCGACG CTTGAACTCC AGCAGGAGAT TCAGCTCGCG CTGGAGAGCA ACCCCCTTCT TGAGCAAACG GACCTTCATG AAGAGATAGA TGCTAAGGAA ACCGTGGACA GTGAATCGCT GGATACCCGC GAAGCACTAG AACAAAAGGA TATGCCGGAA GAATTACCGC TAGATGCCAC CTGGGATGAG ATTTACACCG CAGGTACCCC ATCCGGCATG GGCAATGATT ACAGTGACGA TGAACTGCCC GTCTATCAGG GTGAAACCAC CCAAACACTG CAAGACTATC TGATGTGGCA GGTGGATTTA ACACCGTTCA CTGAGACCGA CGCCGCCATT GCGACTTCTA TCGTTGACGC TGTTGATGAC ACTGGCTATC TCACTGTGCC GCTGGAAGAT ATTCTGGAAA GCATGGGTGA TGAGAACGTA GCGCTAGACG AAGTGGAAGC GGTACTCAAA CGTATTCAGC ATTTTGATCC CATCGGTGTC GCTGCCCGTA ACTTGCGCGA ATGCTTGCTG GTACAGTTAT CACAATATGC CAAAGACACC CCTTATTTGG CCGAAGCGCG TCTGATCGTC AGCGAATATT TAGATTTGCT AGGCAACCAT GATTTCCGCA TGATGATCCG CTTGAGTCGG CTGAAAGAAG ATACACTTAA AGAAGCCATC GCGCTGATCC AATCACTGGA TCCACGGCCA GGTCAGTCGA TCAATACCGG GGAGTCTGAG TATGTCATCC CGGATGTTCT GGTTCGTAAA GAGAAAGGTA TCTGGACGGT GGAGCTGAAT GCCGATAGCA TCCCACGTCT AAAAGTTAAC CAACAATACG CAGCGATGGG CAATAGCGTC CGTAATGACA GTGACGGGCA GTTTATCCGT AGCAATTTGC AAGAAGCAAA ATGGTTGATC AAAAGCCTTG AAAGCCGCAA TGAAACGCTG CTAAAAGTAG CAAAATGTAT TGTAGAACAG CAAGTCGAGT TCTTTGAGAA AGGTGCAGAG TTTATGAAAC CCATGGTACT GGCTGATATC GCCCAGGCTG TGGATATGCA TGAATCAACA ATCTCTCGAG TGACCACGCA GAAATTCTTG CACAGTCCCC GAGGGATTTT TGAACTGAAG TATTTCTTCT CTAGCCACGT CAATACCGAT AGTGGGGGCG AAGCCTCTTC TACGGCGATC CGGGCGCTGG TGAAGAAATT AGTGGCGGCA GAAAACCCTG CCAAGCCATT AAGCGATAGT AAACTAACCA CTTTATTATG TGAACAAGGC ATTATGGTAG CACGGCGCAC CGTCGCAAAA TACCGAGAGT CGTTATCCAT CCCTCCGTCT AATCAACGTA AACAGTTGGT TTGA
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Protein sequence | MKQGLQLKFS QQLAMTPQLQ QAIRLLQLST LELQQEIQLA LESNPLLEQT DLHEEIDAKE TVDSESLDTR EALEQKDMPE ELPLDATWDE IYTAGTPSGM GNDYSDDELP VYQGETTQTL QDYLMWQVDL TPFTETDAAI ATSIVDAVDD TGYLTVPLED ILESMGDENV ALDEVEAVLK RIQHFDPIGV AARNLRECLL VQLSQYAKDT PYLAEARLIV SEYLDLLGNH DFRMMIRLSR LKEDTLKEAI ALIQSLDPRP GQSINTGESE YVIPDVLVRK EKGIWTVELN ADSIPRLKVN QQYAAMGNSV RNDSDGQFIR SNLQEAKWLI KSLESRNETL LKVAKCIVEQ QVEFFEKGAE FMKPMVLADI AQAVDMHEST ISRVTTQKFL HSPRGIFELK YFFSSHVNTD SGGEASSTAI RALVKKLVAA ENPAKPLSDS KLTTLLCEQG IMVARRTVAK YRESLSIPPS NQRKQLV
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