Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A1148 |
Symbol | kdsD |
ID | 5799613 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 1187755 |
End bp | 1188783 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641339124 |
Product | D-arabinose 5-phosphate isomerase |
Protein accession | YP_001605694 |
Protein GI | 162418897 |
COG category | [M] Cell wall/membrane/envelope biogenesis [T] Signal transduction mechanisms |
COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAGATG ACGGTAATAC CAACATTGGG CGGATATTAA GTATGTCTAC TTTTGATTTA CAGCCGGGCG TGGATTTCCA GCAGGCAGGT AAGCAGGTAC TTCAGATTGA ACGCGAAGGG CTGGCTCAAC TCGATCAATA CATAAACGAG GATTTCTCCA GAGCCTGTGA GGCCATTTTT CGTTGCCACG GCAAAGTCGT CGTGATGGGA ATGGGCAAAT CTGGTCATAT TGGCTGCAAA ATTGCAGCCA CATTCGCCAG CACGGGCACA CCTGCATTTT TTGTCCATCC TGGTGAAGCC AGCCATGGCG ATTTGGGCAT GATCACGCCA CAAGATATTG TATTAGCTAT CTCTAACTCT GGGGAATCCA ACGAAATCCT CACGTTGATC CCCGTGCTTA AGCGCCAGAA AATTCTGTTG ATTTGCATGA GCAGTAACCC TGAGAGCACC ATGGGTAAAG CGGCCGATAT TCACTTGTGC ATTAATGTGC CACAAGAGGC CTGTCCGCTG GGGCTAGCGC CAACCACCAG TACGACTGCA ACACTGGTTA TGGGGGATGC GTTGGCGGTA GCCTTGCTCA AAGCACGGGG TTTCACGCAG GAAGATTTCG CACTCTCTCA CCCAGGTGGC GCGCTGGGGC GTAAGTTGCT GCTGCGGATC AGCGATATTA TGCATACGGG TACGGAGATC CCCACCGTCA GCCCTGATGC ATCATTACGT GATGCCTTGC TAGAAATTAC TCGGAAAAGT CTGGGTTTGA CCGTTATTTG TGACGATTCA ATGAGGATTA AAGGTATCTT TACCGACGGT GACTTGCGCC GGGTATTTGA TATGGGCATT GATCTGAATA ATGCAAAAAT TGCTGACGTC ATGACTCGCG GGGGTATTCG AGTCCCTCCG AACATATTGG CGGTGGACGC GCTCAATCTG ATGGAGTCAC GCCATATCAC TGCGTTGCTC GTCGCTGATG GTGACCAATT ACTGGGTGTC GTACATATGC ACGATATGCT GAGAGCCGGT GTTGTCTGA
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Protein sequence | MKDDGNTNIG RILSMSTFDL QPGVDFQQAG KQVLQIEREG LAQLDQYINE DFSRACEAIF RCHGKVVVMG MGKSGHIGCK IAATFASTGT PAFFVHPGEA SHGDLGMITP QDIVLAISNS GESNEILTLI PVLKRQKILL ICMSSNPEST MGKAADIHLC INVPQEACPL GLAPTTSTTA TLVMGDALAV ALLKARGFTQ EDFALSHPGG ALGRKLLLRI SDIMHTGTEI PTVSPDASLR DALLEITRKS LGLTVICDDS MRIKGIFTDG DLRRVFDMGI DLNNAKIADV MTRGGIRVPP NILAVDALNL MESRHITALL VADGDQLLGV VHMHDMLRAG VV
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