Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A1129 |
Symbol | gltD |
ID | 5799594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 1170638 |
End bp | 1172056 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641339105 |
Product | glutamate synthase subunit beta |
Protein accession | YP_001605675 |
Protein GI | 162419974 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
TIGRFAM ID | [TIGR01318] glutamate synthase small subunit family protein, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0513615 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCAGA ACGTTTATCA GTTTATCGAC TTACAGCGCG TCGATCCGCC TAAAAAACCG CTGAAGATCC GTAAAATTGA ATTTGTTGAA ATTTACGAGC CATTCTCAGA AACACAAGCC AAAGCACAGG CCGATCGCTG CCTGTCCTGC GGCAATCCGT ACTGTGAATG GAAATGCCCG GTTCATAACT ACATCCCTAA CTGGCTGAAA CTGGCCAACG AGGGGCGGAT TATGGAAGCG GCTGATCTGG CACACCAAAC GAACAGCCTA CCGGAGGTCT GTGGCCGTGT TTGTCCACAA GATCGCTTGT GTGAAGGATC TTGTACTCTG AACGACGAAT TTGGTGCCGT GACCATCGGC AACATCGAGC GTTATATCAG TGACAAAGCC ATTGCGATGG GCTGGAAACC GGATATGTCA CATGTTCACC CTACCGGTAA ACGTGTGGCC GTGATCGGGG CCGGCCCTGC CGGGCTGGCC TGTGCTGATG TATTAGCACG TAACGGTGTT CAGGCTGTGG TCTTTGACCG CCATCCAGAA ATTGGGGGGT TACTGACCTT CGGTATCCCA GCGTTTAAGC TGGAAAAAGA AGTGATGATT AAACGCCGTA AGATCTTCTC CGAGATGGGA ATTGAATTCC AACTGAATAC TGAAGTAGGC AAAGACATCA CCATGGAAGC ACTGCTGAAA GATTACGACG CCGTGTTCCT GGGGGTTGGG ACCTACCAAT CTATGCGTGG TGGTTTGGAA AACGAAGAGG CTAACAGTGT ATATGATGCC TTGCCTTTCC TGATTGCTAA TACTAAACAG CTAATGGGCT ATGAAGCGAC GGCTCACGAA CCGTATATCA ACATGCAAGG TAAACGCGTC GTGGTGCTTG GTGGCGGTGA TACCGCAATG GACTGTGTGC GCTCCTCAAT TCGTCAGGGG GCAACCGATG TGGTTTGCGC CTATCGCCGC GATGAAGTGA ATATGCCGGG TTCCAAGCGG GAAGTGAAAA ACGCCCGTGA AGAAGGGGTA GAATTTAAAT TCAACCTGCA ACCATTAAGC ATTGAAGTGA ACAGCAATGG CAAAGTCTGT GGTGTCAGAA TGGTCCGCAC CCAGTTGGGC GCGCCAGATG CACAGGGCCG GCGCATGGCT GAACAGATCC CTGGCTCAGA ACATGTATTG CCAGCAGATG CCGTAGTGAT GGCATTTGGT TTCCGCCCAC ACAGTATGGA ATGGCTGGCC GCTCACGATG TGAAGCTGGA TAAGCAAGGC CGGGTGATTG CACCGGAAAG CACTGATAAT GCCTTCCAGA CCAGTAACCC GAAAATCTTT GCGGGCGGCG ATATTGTCCG TGGTTCCGAT TTAGTGGTTA CCGCCATTGC CGAAGGCCGT AAAGCCGCAG ACGGCATCAT GAATTATCTG GAAGTCTAA
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Protein sequence | MSQNVYQFID LQRVDPPKKP LKIRKIEFVE IYEPFSETQA KAQADRCLSC GNPYCEWKCP VHNYIPNWLK LANEGRIMEA ADLAHQTNSL PEVCGRVCPQ DRLCEGSCTL NDEFGAVTIG NIERYISDKA IAMGWKPDMS HVHPTGKRVA VIGAGPAGLA CADVLARNGV QAVVFDRHPE IGGLLTFGIP AFKLEKEVMI KRRKIFSEMG IEFQLNTEVG KDITMEALLK DYDAVFLGVG TYQSMRGGLE NEEANSVYDA LPFLIANTKQ LMGYEATAHE PYINMQGKRV VVLGGGDTAM DCVRSSIRQG ATDVVCAYRR DEVNMPGSKR EVKNAREEGV EFKFNLQPLS IEVNSNGKVC GVRMVRTQLG APDAQGRRMA EQIPGSEHVL PADAVVMAFG FRPHSMEWLA AHDVKLDKQG RVIAPESTDN AFQTSNPKIF AGGDIVRGSD LVVTAIAEGR KAADGIMNYL EV
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