Gene YpAngola_A1005 details

Gene Information

• Locus tag: YpAngola_A1005
• Symbol: dksA
• ID: 5799468
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pestis Angola
• Kingdom: Bacteria
• Replicon accession: NC_010159
• Strand: +
• Start bp: 1030535
• End bp: 1031083
• Gene Length: 549 bp
• Protein Length: 182 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 641338994
• Product: RNA polymerase-binding transcription factor
• Protein accession: YP_001605566
• Protein GI: 162419894
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1734] DnaK suppressor protein
• TIGRFAM ID: [TIGR02420] RNA polymerase-binding protein DksA

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.0000000132792
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: 87
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

TTGCCAACCT ACCTCCCTTC TGTTATTTAT AGCGGCCTGA TTTTTCCCCC TATTGGGGAT 
TTCGATAGTG CGTATGAATG TAGGAGAAGC ATCATGCAAG AAGGGCAAAA ACGTAAAACC 
TCGTCCTTGA GCATTCTCGC CATCGCTGGG GTAGAGCCTT ACCAAGAGAA GCCAGGCGAA 
GAGTATATGA ACGCCGCCCA GCTGTCGCAT TTCAAGCTGA TTCTTGAAGC ATGGCGCAAT 
CAGCTCAGGG ATGAAGTAGA TCGTACTGTA TCGCATATGC AAGACGAAGC TGCTAACTTC 
CCTGATCCGG TGGACCGTGC CGCGCAGGAA GAAGAATTCA GCCTTGAACT TCGTAACCGC 
GACCGCGAGC GTAAACTGAT TAAAAAGATC GAGAAGACGC TGAAAAAAGT TGAAGATGAC 
GATTTTGGTT TCTGCGAGTC TTGTGGCGTA GAAATTGGTA TCCGTCGTCT TGAGGCACGG 
CCAACTGCAG ATTTGTGCAT TGACTGTAAA ACCCTGGCCG AAATCCGCGA AAAGCAGATG 
GCAGGCTAA 

 

Protein sequence

MPTYLPSVIY SGLIFPPIGD FDSAYECRRS IMQEGQKRKT SSLSILAIAG VEPYQEKPGE 
EYMNAAQLSH FKLILEAWRN QLRDEVDRTV SHMQDEAANF PDPVDRAAQE EEFSLELRNR 
DRERKLIKKI EKTLKKVEDD DFGFCESCGV EIGIRRLEAR PTADLCIDCK TLAEIREKQM 
AG