Gene YpAngola_A0904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A0904 
Symbol 
ID5799367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp925732 
End bp926676 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content48% 
IMG OID641338899 
Productsugar-binding domain-containing protein 
Protein accessionYP_001605471 
Protein GI162421073 
COG category[K] Transcription 
COG ID[COG2390] Transcriptional regulator, contains sigma factor-related N-terminal domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAGAC AAGATGAACA ACGGTTACTG GTCAAGATTG CCACGCTGTA TTACACCGAA 
GGTATGAAGC AATCCGAGAT TGCTGATAGC CTGCATTTAT CTCAATCCTT CGTGTCTCGT
GCGATAACGC GGTGTGTCAA AGAAGGTGTG GTTAAAATCA GTGTGATTCA ACCCGCTAAT
ATGTTTATTG GTATCGAATC ACGTATTCAA AAACACTATG GTATAGATCA GGCCATTGTG
GTGGATATTA CCGATGACGC CAGCCCCGCA CAGATAAAAC AGGCTATTGG CTCAGCTGCC
GCCCATTATA TGCAAACCAG TATTCGTCCA AACGATATGG TGGGTATTTC TTCATGGAGC
AGTACCATCC GGGCGATGGT CGATAACCTT CATCCCCTCA ATATCAAAAC CAGTGGCGTG
ATTCAATTGC TCGGAGGTGT CGGCCCTAAC GGCAACGTGC AGGCCACATT GTTAACTCAA
TCATTGGCAA ATATTTTAAA CTGCCCTGCC TATCTCCTGC CCGCACAAAG CATTGAACGT
TCTACTGAAG ATCGTGCCCG CCTGATATCC AGTGGTGAAG TGGCCGATGT CGTGAATAAA
TTTGCCGAAG TTGATCTGGC ATTAGTGGGG ATCGGTGTTC TGGAACCCTC CCAATTACTG
AAAAATTCCG GCAACTATTA CCACGAAGAG ATGCTGAAAT TACTGGCCGA ACGCGGGGCT
GTGGGGGATT TGTGTTTACA TTATTTTGAT GCCGCGGGCA ATGCGGTACT CAGCGATGAG
GAAGACCCAG TCATTGGAAT GTCATTACCC CAATTACGTG CTTGCCCACG GGTCGTGGCA
CTGGCTGGGG GGATAGAGAA AAGTGCTGCT ATTCGAGGTG CACTGACCGG TAACTACATT
GATGTGCTAA TTACCGACCG GCTGACAGCA GAAACATTAC TCTAG
 
Protein sequence
MSRQDEQRLL VKIATLYYTE GMKQSEIADS LHLSQSFVSR AITRCVKEGV VKISVIQPAN 
MFIGIESRIQ KHYGIDQAIV VDITDDASPA QIKQAIGSAA AHYMQTSIRP NDMVGISSWS
STIRAMVDNL HPLNIKTSGV IQLLGGVGPN GNVQATLLTQ SLANILNCPA YLLPAQSIER
STEDRARLIS SGEVADVVNK FAEVDLALVG IGVLEPSQLL KNSGNYYHEE MLKLLAERGA
VGDLCLHYFD AAGNAVLSDE EDPVIGMSLP QLRACPRVVA LAGGIEKSAA IRGALTGNYI
DVLITDRLTA ETLL