| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A0898 |
|---|
| Symbol | alaS |
|---|
| ID | 5799361 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | - |
|---|
| Start bp | 917371 |
|---|
| End bp | 919998 |
|---|
| Gene Length | 2628 bp |
|---|
| Protein Length | 875 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641338894 |
|---|
| Product | alanyl-tRNA synthetase |
|---|
| Protein accession | YP_001605466 |
|---|
| Protein GI | 162420472 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0013] Alanyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000010723 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAGA GCACCGCTGA GATCCGTCAA GCGTTTCTCG ATTTCTTCCA TAGCAAGGGA
CACCAGGTTG TATCAAGCAG CACTTTGGTC CCTAATAATG ACCCTACGCT GTTGTTTACC
AATGCCGGGA TGAACCAGTT TAAGGACGTT TTCTTAGGTT TGGATAAACG GGCCTATTCC
CGTGCGACGA CCTCTCAGCG CTGCGTGCGA GCGGGTGGTA AGCATAACGA CCTGGAAAAC
GTAGGTTATA CCGCGCGTCA TCATACTTTC TTCGAAATGT TGGGTAACTT CAGCTTCGGC
GATTACTTCA AGCATGATGC TATCAACTTC GCTTGGGAGT TACTGACCAG TGAACAGTGG
TTTAATTTAC CAAAAGAAAA ACTTTGGGTA ACGGTGTACG AGACCGATGA CGAGGCCTAT
AACATCTGGG CTAACGAAGT CGGCGTTCCT CATGAGCGTA TCATCCGTAT CGGTGATAAC
AAAGGGGGGG CCTTTGCCTC AGATAACTTC TGGCAAATGG GTGATACCGG CCCTTGTGGC
CCATGTTCAG AGATTTTCTT TGACCATGGT GATCATATCT GGGGTGGTCC TCCAGGGTCT
GCAGAAGAAG ATGGCGATCG CTATATCGAG ATCTGGAATA TCGTCTTTAT GCAGTTTAAC
CGTCAGTCTG ACGGTACGAT GCTGCCATTG CCGAAGCCAT CGGTTGATAC CGGCATGGGG
CTGGAACGTA TTGCTGCGGT ATTACAGCAT GTTAACTCCA ACTATGAGAT TGACCTGTTC
CGTGATTTGA TTGCCGCAGT CGCAGATGTC ACGGGGGCGA CGGATTTATC CAGCAAGTCG
TTGCGGGTTA TTGCTGATCA CATTCGTTCT TGTGCTTTCT TGATTTCAGA TGGTGTGATC
CCATCGAATG AAAACCGCGG CTATGTCTTA CGCCGTATTA TTCGCCGTGC AATTCGCCAC
GGGAATATGT TGGGTGCGAA AGAGACTTTC TTCTACAAAC TGGTGGCTCC CTTGATCGCG
GTTATGGGGC CTGCTGCTGC TGAGTTAAAA CAACAGCAAG CGATGGTAGA GCAAGTATTA
AAGACGGAAG AAGAGCAGTT TGCCAGGACG TTAGAGCGCG GTTTGGCGCT GCTTGATGAC
GAGCTCAGCA AGCTTACCGG CGATACCCTT GATGGGGAAA CGGCCTTCCG CTTGTACGAT
ACCTATGGCT TCCCAGTTGA TCTAACGGCA GATGTTTGTC GCGAACGTAA CCTGAAAGTC
GATGAAGCTG GCTTTGAGCA AGCGATGGAA GCTCAACGTC GCCGTGCCCG TGAATCCAGT
GGTTTTGGCG CAGATTACAA CAGCTTGATC CGTGTTGATA GCGCAAGCCA ATTTTCTGGT
TATGACCATG TCCAACAACA CGCGACGGTT ACTGCTCTAT TCCGTAATGG CGAGGCCGTT
GATGAGATTC ACGCAGGTGA AGAAGCCGTT GTCGTACTGA ATCGGACACC ATTCTACGGT
GAATCGGGTG GTCAGGTCGG CGATAAGGGG GAACTGAAAA ATGCGACAGC AACCTTTAGC
GTTACTGATA CTCAGAAATA TGGTCAGGCT ATCGGGCACG TAGGAATATT GACTACCGGC
ACGTTAAGAG TTAACCACAG CGTCGAAGCA TTGGTTGATG TTGTGCGTCG TAACCGTATC
CGTCTGAATC ACTCCGCGAC CCACTTACTG CATGCTGCGT TACGTAACGT CTTGGGCGAG
CATGTGGCCC AGAAGGGGTC ACTGGTTAAT GACAAATATC TACGCTTTGA TTTCTCTCAT
TTCGAAGCAA TGAAGCCGGA ACAAATCCGG TTGGTAGAAG ATCTGGTCAA TGAACAAATC
CGCCGTAACA TGCCGGTTCA GACCGAAGTG ATGGAACTGG ATGCGGCGAA AGAAAAAGGT
GCAATGGCAC TGTTCGGCGA GAAGTATGAC GACCAAGTAC GTGTTCTGAC CATGGGTGAC
TTCTCAACAG AGTTGTGTGG GGGGACTCAT GCTAGCCGCA CGGGGGATAT AGGGTTATTC
CGCATCCTGA CCGAATCTGG CACGGCTGCG GGTATTCGTC GTATTGAAGC CGTCACTGGC
GAGGGCGCGA TTGCTTTATT GCATCAGCAA AGCGACCTGT TACAGGACGT CGCTCATCTG
GTGAAAGGTG ATATTCATAA TCTGGCAGAC AAAGTCCGGG CGGTATTGGA TCGCAGTAAA
ATGCTTGAGC GTGAGTTGCA ACAGTTGAAA GATCAGCAGG CAGCTCAGGA AAGTGCCTCG
TTGTCTTCAA GCGCGAAATT GATCAATGGT GTGAAGCTTT TGGTCAGTCA GTTGGATAAC
GTTGAACCAA AAATGCTACG GACAATGGTC GATGACCTTA AAAATCAACT GGGTTCTGCC
ATTATTGTAT TGGCCACCAC AGCTGATGAT AAGGTAAGTT TGATTGTTGG GGTGACCAAG
GACCTGACAG GTAAAGTAAA AGCGGGTGAA TTAATCGCGG ACATTGCTCA GCAGGTGGGC
GGTAAAGGCG GTGGTCGTCC TGATATGGCT CAGGCGGGGG GTACTGATGT GCAGGCTTTG
CCAGCGGCAT TAGCCAGCGT AGAAGCATGG GTAGCATCCC GGATGTAA
|
|---|
| Protein sequence | MSKSTAEIRQ AFLDFFHSKG HQVVSSSTLV PNNDPTLLFT NAGMNQFKDV FLGLDKRAYS
RATTSQRCVR AGGKHNDLEN VGYTARHHTF FEMLGNFSFG DYFKHDAINF AWELLTSEQW
FNLPKEKLWV TVYETDDEAY NIWANEVGVP HERIIRIGDN KGGAFASDNF WQMGDTGPCG
PCSEIFFDHG DHIWGGPPGS AEEDGDRYIE IWNIVFMQFN RQSDGTMLPL PKPSVDTGMG
LERIAAVLQH VNSNYEIDLF RDLIAAVADV TGATDLSSKS LRVIADHIRS CAFLISDGVI
PSNENRGYVL RRIIRRAIRH GNMLGAKETF FYKLVAPLIA VMGPAAAELK QQQAMVEQVL
KTEEEQFART LERGLALLDD ELSKLTGDTL DGETAFRLYD TYGFPVDLTA DVCRERNLKV
DEAGFEQAME AQRRRARESS GFGADYNSLI RVDSASQFSG YDHVQQHATV TALFRNGEAV
DEIHAGEEAV VVLNRTPFYG ESGGQVGDKG ELKNATATFS VTDTQKYGQA IGHVGILTTG
TLRVNHSVEA LVDVVRRNRI RLNHSATHLL HAALRNVLGE HVAQKGSLVN DKYLRFDFSH
FEAMKPEQIR LVEDLVNEQI RRNMPVQTEV MELDAAKEKG AMALFGEKYD DQVRVLTMGD
FSTELCGGTH ASRTGDIGLF RILTESGTAA GIRRIEAVTG EGAIALLHQQ SDLLQDVAHL
VKGDIHNLAD KVRAVLDRSK MLERELQQLK DQQAAQESAS LSSSAKLING VKLLVSQLDN
VEPKMLRTMV DDLKNQLGSA IIVLATTADD KVSLIVGVTK DLTGKVKAGE LIADIAQQVG
GKGGGRPDMA QAGGTDVQAL PAALASVEAW VASRM
|
|---|
| |