Gene YpAngola_A0852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A0852 
Symbol 
ID5799314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp878152 
End bp879315 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content47% 
IMG OID641338849 
Productputative lipopolysaccharide heptosyltransferase III 
Protein accessionYP_001605426 
Protein GI162419704 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0859] ADP-heptose:LPS heptosyltransferase 
TIGRFAM ID[TIGR02201] lipopolysaccharide heptosyltransferase III, putative 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAATA CATCAAATAA GACAGCATCA CCTGCCGGGC AACTTTCTGC TCCCGCTTCT 
CAAACCGGTG CCAGCCACTT GCCGGAAGTA CTGCGGAATA AAGAGCATGT TGCGCGCATT
TTAGTGATTA AGTTACGGCA TTTCGGCGAT GTTCTACTGA CGACGCCGCT ACTGAGTACG
CTGAAAGCCA ATTATCCGCA GGCTAAAATC GATGTACTGC TGTATGGCGG TACGCAGGAT
ATGTTGCGTG AAAACAAGGC GATCAATCAT ACCTTTATTG TTGATCGGGG CCTGAAGCAT
GCAGGATTAA AGGCGCAAAT CAGTGGCGAA AAAGCACTGT TTAGCGCCCT AAAAAAACAA
CATTATGATT TGATTCTTAA TTTATCCGAT CAATGGCGGG CTGCGGCGTA TTGCCGTTTG
TTAAAACCCA CGTTTAGTAT CGGTTTCCAC TACCCAAAAC GGGACAATTG GCTCTGGCGT
TACTGCCATT CCACATTGGT TGAGATCCCT AATGCTGCAG AACGGCACAC GGTACTCAAT
AATCTGGATA TTCTCTCACC ACTACAACTG ACCGACATCA GGACCGACGT CACCATGTCC
TATGGGCCGC ATGATATCGA GCGGGCAAAG CAGTTGTGCC AACAGCATAA TATTGAACAC
TATATTTTGA TTCAGCCTTC CGCCCGCTGG AAATTCAAAA CCTGGGCCAG CGAATCCTTC
AGTGAATTGA TCAACCACCT CACTCAACAA GGTGAAACTG TTCTGCTGAC GGGCAGTAAA
GATCAGGCTG AATTGGATTA CATCGCTGAG ATTATTGCTG GCTGCACACA ACCGGAAAAG
GTGATCAATT TATCGGGTCA ATTGGCATTG CCTGAACTGG CGGTCTTAAT TGATAACGCC
AAATTATTTA TTGGTGTTGA TTCTGTGGCA ATGCATATGG CTGCTGCGTT ACAGACGCCA
GCAGTGGTAC TATTTGGCCC GAGTAATCTT AATCAATGGC ACCCGTGGCA GGCTCCACAT
ACTTTACTCT GGGCTGGCAA TTACCGCACT TTGCCGCATC CCAATGAAAT AGATACTGAC
ACTACTGATC GCTATCTGAA CGCAATCCCA GTTAGTGATG TCATAGACGC AGTTGATTCC
TGGCGAGTTG CCAAAGGGAA TTAG
 
Protein sequence
MINTSNKTAS PAGQLSAPAS QTGASHLPEV LRNKEHVARI LVIKLRHFGD VLLTTPLLST 
LKANYPQAKI DVLLYGGTQD MLRENKAINH TFIVDRGLKH AGLKAQISGE KALFSALKKQ
HYDLILNLSD QWRAAAYCRL LKPTFSIGFH YPKRDNWLWR YCHSTLVEIP NAAERHTVLN
NLDILSPLQL TDIRTDVTMS YGPHDIERAK QLCQQHNIEH YILIQPSARW KFKTWASESF
SELINHLTQQ GETVLLTGSK DQAELDYIAE IIAGCTQPEK VINLSGQLAL PELAVLIDNA
KLFIGVDSVA MHMAAALQTP AVVLFGPSNL NQWHPWQAPH TLLWAGNYRT LPHPNEIDTD
TTDRYLNAIP VSDVIDAVDS WRVAKGN