Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A0825 |
Symbol | radA |
ID | 5799287 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 848140 |
End bp | 849522 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641338822 |
Product | DNA repair protein RadA |
Protein accession | YP_001605400 |
Protein GI | 162419018 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1066] Predicted ATP-dependent serine protease |
TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGAAAG CACCCAAACG GGCGTTTGTC TGTAATGAAT GTGGCGCAGA TTATCCGCGT TGGCAGGGGC AATGCAGTGC CTGTAACGCC TGGAATACCA TTACCGAAGT CAGGCTGGCG GCGGTAGCGT CATCGTCTCG TAATGACCGT TTTGTTGGTT ATGCTGGCGA TGCCGGTGTT AGCCGGGTAC AGAAGCTGTC CGATATTAGT CTGGAGGAGT TGCCGCGCTT CTCAACCGGC TTTCTCGAGT TTGATCGGGT GCTGGGCGGC GGGGTGGTAC CGGGCAGTGC CATTTTGATT GGCGGTAACC CCGGCGCAGG CAAAAGTACT CTATTGCTGC AAACCCTCTG CAAACTGTCG GAAAACATGA AAACCCTGTA TGTTACTGGC GAAGAGTCGT TGCAGCAGGT CGCCATGCGC GCGCACCGTC TGGGCCTGCC CACGGCGGGG CTGAATATGT TGTCGGAAAC CAGTATCGAG CAGATTTGCC TGATAGCAGA GCAAGAACAG CCACGGCTGA TGGTCATCGA CTCCATTCAA GTAATGCATA TGGCGGATAT CCAATCATCG CCGGGCAGTG TGGCGCAAGT GCGCGAAACT GCGGCTTATC TGACTCGTTT TGCTAAAACC CGGGGTGTCG CCATCGTGAT GGTGGGGCAT GTGACCAAAG ACGGTTCGCT GGCCGGGCCG AAAGTATTAG AACACTGTAT TGACTGCTCC GTGATGCTTG ATGGTGATGG CGACTCACGC TTTCGTACTC TGCGTAGCCA CAAAAACCGC TTTGGTGCGG TTAACGAACT GGGTGTGTTT GCCATGACCG AGCAAGGTCT ACGGGAAGTC AGTAATCCAT CGGCGATCTT TTTGAGCCGT GGCGATGAAG TGACCGCAGG CAGTTCAGTG ATGGTGGTGT GGGAAGGGAC TCGCCCATTG CTGGTGGAGA TCCAAGCGCT GGTAGATCAT TCGATGATGT CGAATCCACG CCGGGTCGCT GTCGGGCTGG AACAAAACCG CTTGGCCATC TTATTGGCTG TTTTACACCG CCACGGTGGT TTGCAGATGT CAGATCAAGA CGTGTTCGTT AACGTCGTTG GCGGGGTGAA AGTCACTGAA ACCAGCGCTG ATCTGGCATT GTTGATGTCG CTGGTCTCCA GTCTGCGTGA CCGCCCATTA CCGCAAGATT TAGTGGTGTT TGGCGAGGTG GGGCTGGCCG GTGAAATCCG CCCGGTACCA AGTGGTCAGG AGCGTATCTC CGAGGCGGCA AAGCACGGTT TTAAACGTGC CATCGTGCCT TATGCCAATA TGCCTAAAAA ACCGCTACCC AATATGCAGG TTTTCGGGGT AAAAAAACTG GCCGATGCGT TGGCTGTTTT AGAAGATTTA TAA
|
Protein sequence | MAKAPKRAFV CNECGADYPR WQGQCSACNA WNTITEVRLA AVASSSRNDR FVGYAGDAGV SRVQKLSDIS LEELPRFSTG FLEFDRVLGG GVVPGSAILI GGNPGAGKST LLLQTLCKLS ENMKTLYVTG EESLQQVAMR AHRLGLPTAG LNMLSETSIE QICLIAEQEQ PRLMVIDSIQ VMHMADIQSS PGSVAQVRET AAYLTRFAKT RGVAIVMVGH VTKDGSLAGP KVLEHCIDCS VMLDGDGDSR FRTLRSHKNR FGAVNELGVF AMTEQGLREV SNPSAIFLSR GDEVTAGSSV MVVWEGTRPL LVEIQALVDH SMMSNPRRVA VGLEQNRLAI LLAVLHRHGG LQMSDQDVFV NVVGGVKVTE TSADLALLMS LVSSLRDRPL PQDLVVFGEV GLAGEIRPVP SGQERISEAA KHGFKRAIVP YANMPKKPLP NMQVFGVKKL ADALAVLEDL
|
| |