Gene YpAngola_A0702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A0702 
Symbol 
ID5799164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp709976 
End bp711871 
Gene Length1896 bp 
Protein Length631 aa 
Translation table11 
GC content51% 
IMG OID641338701 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_001605282 
Protein GI162418625 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00039621 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCATA GCCTCTCGCT GATATGTCGC TGGAAACACG GTTTCGCTAC GATTCGCCAT 
TTCACTACTG TCCACCGCGT CATTACTGCT CGTCGTTTCG CCACGGTCAC GCGGATGATT
ATTGGTTTAT TAACGCTCAG TTTATTCGCT CTGCCTCCCG CATTTGCCAT GAAACTCACT
GACATTAAGG TGACCAACGG GGCGAGTGAA AGTAAGGTTA CTCTCAGCTT TGATGGTAAG
CCAATTTATG CATTTTTCTC GCTAAACTCG CCGGAGCGGG TGGTCTTGGA TGTCCGCCAA
AGTGGCAATA TCTCAGGGTT GCCGCTGGAG TTCAGTGGGC AGAACCTGTT GAAACGAATT
CGCTCCAGCA CTCCGAAAGA TGAACAAAGT ACCCGCCTGG TACTGGAACT GACGCAGAAA
GTAAAAACCC GTGCTGTCAC CCAACAGTCG GGCAATAACT ACACGGTAGT GCTTACCATG
ACGGCCGTCG CCAGTGCCCC TGTTCGTCAG GCGCAGGCCT CATTAAATCA GACGAATACC
CCGAGTCCTA ATGCCGGGCG TGTGGTGCCT CAAGTCACGA GCAAGGATTC AGTAGCTAAA
AATCCGTTTA ATAATAAGCC CGTCGTCGTG GTCAGTAGCG AAAACGTGAC CACGAATACT
GCCCGTCCGA TTAAAACTGT GAGTGCGGCT AACAGTAGCC GTGTTGTGGT GGCCATAGAT
GCCGGTCATG GTGGTCAGGA CCCAGGCGCT ATCGGGCAAA ATGGTCTGAA AGAGAAAAAT
GTCACGATCT CCATTGCCCG CCGGCTTGAG GCACTGCTCA ACCGGGATCC GATGTTTAAA
CCGGTGCTGA CCCGCAATGG TGATTACTTT ATCTCGGTCA TGGGGCGCTC TGATGTTGCA
CGTAAACAGG GGGCTAATGT CTTGATTTCT ATTCATGCTG ATGCCGCGCC AAATCGCAGT
GCGACAGGGG CATCGGTTTG GGTGTTATCA AACCGCCGGG CTAATAGTGA AATGGGGAAC
TGGCTGGAGC AACATGAAAA GCAATCAGAA CTGCTCGGGG GGGCTGGTGA TGTACTGGCA
AACACGGCTT CAGACCCTTA TTTGAGTCAG GCGGTTCTGG ATTTACAATT TGGTCACTCC
CAGAGAGTGG GTTATGACGT CGCGACTAAA GTGCTGCGTG AGCTACAAAC GGTGGGTGAT
ATTCATAAAC GCAAGCCGGA GCACGCCAGC CTTGGGGTGT TACGTTCACC GGATATTCCG
TCGCTATTAG TGGAAACCGG CTTTATCAGT AATAGTACGG AGGAACGGCT GCTTGGCAGT
AGCGCGTATC AGGAGAAGAT TGCTCAGGCC ATTTATAAAG GCTTGCGCAG TTATTTCCTC
GCGAATCCGT TACAATCCGA CCCAAAGGTC GAAAGCCGTC CGCTCATTGA AACAGCGGCG
GTTGACTCCT CAACACAGCG TTCAGGTATT AGTCAGCCGG AACCTATTGT GAATAATATA
AGCAGTAATG CGCAAAGTGG CCGGTCATCG GCTACTCTGC CTGCAGGTAA GAGCAAAATC
CACAACGTGC AGCGTGGGGA GACGTTATCG GGTATTGCCA GCCAATACGG CGTCAGCATG
GCTGTTTTAC GACAAAATAA TACGCTGAAA AATGATGTAG TCTGGGTAGG CCAGCGGTTG
AAAGTGCCCG CGTCGGGCAG TACGGTAACG GCAGTCAAGC CTAAAACAGC CGCTGTAGCA
AAAAGTAAAC CTATTAAGCA TCAGGTGAAA CGCGGTGATA CGCTGTCAGC CATTGCGGCG
AGATACGGTG TATCAATGAG TGAGATTGAG CGGGTGAATA AAATCAAGTC AGGTAATGTT
CAGCTTGGGC AAACGCTCAC TATTCCACAA TCGTAA
 
Protein sequence
MMHSLSLICR WKHGFATIRH FTTVHRVITA RRFATVTRMI IGLLTLSLFA LPPAFAMKLT 
DIKVTNGASE SKVTLSFDGK PIYAFFSLNS PERVVLDVRQ SGNISGLPLE FSGQNLLKRI
RSSTPKDEQS TRLVLELTQK VKTRAVTQQS GNNYTVVLTM TAVASAPVRQ AQASLNQTNT
PSPNAGRVVP QVTSKDSVAK NPFNNKPVVV VSSENVTTNT ARPIKTVSAA NSSRVVVAID
AGHGGQDPGA IGQNGLKEKN VTISIARRLE ALLNRDPMFK PVLTRNGDYF ISVMGRSDVA
RKQGANVLIS IHADAAPNRS ATGASVWVLS NRRANSEMGN WLEQHEKQSE LLGGAGDVLA
NTASDPYLSQ AVLDLQFGHS QRVGYDVATK VLRELQTVGD IHKRKPEHAS LGVLRSPDIP
SLLVETGFIS NSTEERLLGS SAYQEKIAQA IYKGLRSYFL ANPLQSDPKV ESRPLIETAA
VDSSTQRSGI SQPEPIVNNI SSNAQSGRSS ATLPAGKSKI HNVQRGETLS GIASQYGVSM
AVLRQNNTLK NDVVWVGQRL KVPASGSTVT AVKPKTAAVA KSKPIKHQVK RGDTLSAIAA
RYGVSMSEIE RVNKIKSGNV QLGQTLTIPQ S