Gene YpAngola_A0641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A0641 
Symbol 
ID5799103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp644247 
End bp645461 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content53% 
IMG OID641338642 
Productputative inner membrane protein 
Protein accessionYP_001605223 
Protein GI162420221 
COG category[R] General function prediction only 
COG ID[COG2391] Predicted transporter component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.0619351 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTGGC CCGAGTTTAA ATCTCAATAT CTGGTGCGCT TTTGGGCACC TTTACCTGCG 
GTTATTGCTG CCGGTATCTT AGCGACCTAT TACTTTGGTT TGACTGGCAC GTTCTGGGCG
GTCACTGGTG AGTTTACTCG CTGGGGGGGC CATATTATGC AATTGTTTGG TGCGCAGCCA
CAGGAGTGGG GCTATTTTAA AGTGATCGGT CTGGAAGGAA CGCCACTGGA TCGTATCGAT
GGCATGATGA TTATCGGTAT GTTCGCCGGT TGTATCGCTG CGGCACTCTG GGCTAACAAT
ATTAAGTTAC GTAAGCCGCA ACACACTATC CGCATTGCAC AGGCGCTGGT GGGGGGCATA
ATTGCTGGTT TTGGTGCCCG TCTGGCGATG GGGTGCAATT TAGCCGCCTT CTTTACCGGC
ATTCCGCAAT TTTCACTGCA CGCGTGGTTT TTTGCACTAG CGACGGCAGC GGGCTCTTAC
TTTGGGGCCA AATTTACGCT GCTCCCCCTG TTCCGCATTC CGATTAAACT ACAAAAAGTG
ACTGCCGCCT CACCACTGAC GCAGCACCCA GCCAGAGCGG CACGCCGTTT CCGTCTGGGA
ATGGTGGTCT TGGTTCTGGC GCTTGGCTGG TCCCTGATTG AGTTGTTCCG TCAGCCTAAA
TTGGGGATTG CCATGCTGTG CGGGATTGGC TTTGGGCTCC TGATTGAACG TGCTCAGATT
TGCTTTACCT CCGCTTTTCG TGACTTGTGG ATAACCGGGC GCACCCATAT GGCTAAGGCC
ATTATTCTAG GAATGGCGGT CAGTACTCTC GGCATTTTCA GCTACGTCCA ACTGGGCGTC
GAACCTAAAA TTCTGTGGGC TGGGCCAAAT GCGGTAATAG GTGGTTTACT GTTTGGTTTT
GGTATCGTGC TGGCGGGTGG CTGTGAAACC GGTTGGATGT ACCGTGCGGT GGAAGGGCAA
ATTCATTATT GGTGGGTGGG ATTGGGCAAT ATTATCGGCG CAACTCTCTT GGCCTACTAC
TGGGACGATT TCGCCCCTGC GTTGGCGACC AATTACGATA AAGTTAACCT GTTGGAGACG
TTCGGACCGA TGGGCGGGTT GCTGGTGACT TACCTAATGT TGGCACTAGC ATTTGCCGCC
ATGCTGTGGT GGGAGAAGCG TTTCTTTCGC AAACAAAAAG CGACAACCTC GGCCCTGATT
AAGGAATCCT TATGA
 
Protein sequence
MSWPEFKSQY LVRFWAPLPA VIAAGILATY YFGLTGTFWA VTGEFTRWGG HIMQLFGAQP 
QEWGYFKVIG LEGTPLDRID GMMIIGMFAG CIAAALWANN IKLRKPQHTI RIAQALVGGI
IAGFGARLAM GCNLAAFFTG IPQFSLHAWF FALATAAGSY FGAKFTLLPL FRIPIKLQKV
TAASPLTQHP ARAARRFRLG MVVLVLALGW SLIELFRQPK LGIAMLCGIG FGLLIERAQI
CFTSAFRDLW ITGRTHMAKA IILGMAVSTL GIFSYVQLGV EPKILWAGPN AVIGGLLFGF
GIVLAGGCET GWMYRAVEGQ IHYWWVGLGN IIGATLLAYY WDDFAPALAT NYDKVNLLET
FGPMGGLLVT YLMLALAFAA MLWWEKRFFR KQKATTSALI KESL