Gene YpAngola_A0614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A0614 
Symbolfmt 
ID5799077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp624463 
End bp625410 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content47% 
IMG OID641338617 
Productmethionyl-tRNA formyltransferase 
Protein accessionYP_001605205 
Protein GI162419460 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID[TIGR00460] methionyl-tRNA formyltransferase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00549944 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.0281332 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTGATT CTTTGCGGAT TATTTTTGCC GGAACTCCTG ATTTTGCAGC GCGCCATTTA 
GGCGCGTTGC TCTCTTCTCA ACATAAGATT GTTGGTGTGT TCACTCAACC AGACCGCCCG
GCTGGCCGAG GTAATAAACT CACCCCCAGC CCAGTTAAAA TATTGGCAGA ACACCACGGC
ATCCCTGTTT TTCAGCCCAA GTCATTAAGA CCTGAAGAGA ACCAACATTT AGTTGCCGAC
CTCAATGCTG ACATCATGGT CGTAGTGGCT TATGGCTTAA TACTACCTGC AGCGGTGTTA
GCGATGCCAC GTTTAGGCTG CATCAATGTT CATGGTTCGT TACTCCCACG TTGGCGTGGT
GCAGCACCGA TCCAACGTTC AGTATGGGCG GGTGACGAAA AAACGGGGAT TACTATCATG
CAGATGGATA TCGGGTTAGA TACCGGTGCT ATGCTGCATA AAATTGAATG TGCCATTCAA
CCAGAAGATA CCAGTGCGAC ACTGTATGAT AAATTAGCAC AATTGGGGCC TCAAGGGCTG
TTGATAACAT TACAACAGCT AGCCGCAGGC ACAGCCCTAG CAGAAGTTCA AAATGAAACA
CAAGCAACCT ATGCGGAGAA GCTAAGTAAA GAGGAAGCCA AATTAGATTG GACACTTTCT
GCAACTCAGT TAGAACGCTG TATCCGTGCA TTTAACCCTT GGCCTGTCAG CTATTTTATT
GTTGATGAAC AGCCAATCAA AGTTTGGCAA GCGCAGGTAC TCCCTGCTGG CGAGGATGCA
GAACCAGGCA CCATTATCCA TGCAGATAAG CATGGTATCC AAGTTGCAAC TGCTGATGGC
GTTTTGAATA TCACACAACT CCAGCCTGCA GGGAAAAAAG CAATGTCAGC CGCTGACTTA
TTAAACTCTC GGCGAGAATG GTTTATACCA GGTAGTCAAC TAGTGTAA
 
Protein sequence
MSDSLRIIFA GTPDFAARHL GALLSSQHKI VGVFTQPDRP AGRGNKLTPS PVKILAEHHG 
IPVFQPKSLR PEENQHLVAD LNADIMVVVA YGLILPAAVL AMPRLGCINV HGSLLPRWRG
AAPIQRSVWA GDEKTGITIM QMDIGLDTGA MLHKIECAIQ PEDTSATLYD KLAQLGPQGL
LITLQQLAAG TALAEVQNET QATYAEKLSK EEAKLDWTLS ATQLERCIRA FNPWPVSYFI
VDEQPIKVWQ AQVLPAGEDA EPGTIIHADK HGIQVATADG VLNITQLQPA GKKAMSAADL
LNSRREWFIP GSQLV