Gene YpAngola_A0611 details

Gene Information

• Locus tag: YpAngola_A0611
• Symbol: mscL
• ID: 5799074
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pestis Angola
• Kingdom: Bacteria
• Replicon accession: NC_010159
• Strand: -
• Start bp: 621096
• End bp: 621509
• Gene Length: 414 bp
• Protein Length: 137 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 641338614
• Product: large-conductance mechanosensitive channel
• Protein accession: YP_001605202
• Protein GI: 162420048
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1970] Large-conductance mechanosensitive channel
• TIGRFAM ID: [TIGR00220] large conductance mechanosensitive channel protein

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.0263138
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 36
• Fosmid unclonability p-value: 0.217178
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGCTTTA TGAAAGAATT TCGTGAATTT GCCATGCGTG GCAATGTGGT TGACTTAGCT 
GTTGGTGTGA TTATTGGTGC TGCATTCGGC AGAATTGTCT CTTCGCTCGT TGCCGATATT 
ATCATGCCAC CACTGGGGTT ATTGCTAGGC GGGGTAGATT TTAAACAATT CCATTTTGTA 
TTACGAGCCG CTGAAGGGAC TATACCCGCG GTAGTAATGA ATTATGGTAC ATTTATTCAA 
AGCATTTTTG ATTTTGTTAT TGTAGCCCTC GCTATATTCT CCGCTGTTAA GTTAATGAAT 
AAGCTACGCC GTGAAAAAGC GGAAGAAGAA CCTGCTACAC CGCCAGCACC AACGACTGAA 
GAGATACTAT TAGCTGAGAT TCGCGATTTA TTAAAAGCGC AGCACACAAA ATAG 

 

Protein sequence

MSFMKEFREF AMRGNVVDLA VGVIIGAAFG RIVSSLVADI IMPPLGLLLG GVDFKQFHFV 
LRAAEGTIPA VVMNYGTFIQ SIFDFVIVAL AIFSAVKLMN KLRREKAEEE PATPPAPTTE 
EILLAEIRDL LKAQHTK