Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A0602 |
Symbol | secY |
ID | 5799065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 614016 |
End bp | 615347 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641338605 |
Product | preprotein translocase subunit SecY |
Protein accession | YP_001605193 |
Protein GI | 162420826 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0201] Preprotein translocase subunit SecY |
TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000129742 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.608925 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAAGC AACCAGGATT AGATTTTCAA AGTGCTAAAG GCGGATTAGG CGAGCTGAAG CGCAGACTTT TGTTTGTTAT CGGTGCGCTT ATTGTTTTCC GTATCGGCTC TTTTATTCCG ATTCCTGGTA TCGATGCCAC TGTGCTTGCC AAATTGCTTG AGCAGCAGAG AGGCACCATC ATTGAAATGT TTAACATGTT TTCTGGTGGT GCTCTCAGTC GTGCTTCTAT CTTTGCCTTG GGTATCATGC CGTATATTTC GGCATCAATT ATTATCCAAC TGTTAACGGT GGTACATCCA GCGTTAGCAG AAATAAAGAA AGAAGGGGAA GCTGGCCGTC GTAAGATTAG CCAGTACACC CGTTATGGCA CGTTGGTATT GGCTATATTC CAATCGATCG GTATTGCTAC CGGTCTTCCG AATATGCCTG GGATGCAAGG TCTGGTAATC AATCCAGGCT TTGCTTTCTA TTTTACCGCT GTTGTTAGCT TAGTCACAGG GACTATGTTC CTGATGTGGC TGGGTGAACA GATTACTGAA CGGGGTATCG GAAACGGTAT TTCAATCATA ATCTTTGCTG GTATTGTTGC GGGGCTTCCT CCTGCAATTG CCCATACCAT CGAGCAAGCT CGGCAAGGCG ACCTGCACTT CCTCCTGTTG CTGTTGGTTG CAGTATTAGT GTTTGCAGTA ACCTTCTTCG TTGTTTTCAT TGAACGTGGT CAACGTCGTA TTGTCGTTAA CTATGCAAAA CGTCAACAAG GTCGTCGTGT TTATGCAGCA CAGAGCACAC ACTTACCGTT GAAAGTGAAT ATGGCTGGGG TTATCCCTGC AATCTTCGCT TCCAGCATAA TTCTGTTTCC TGCCACGATT GCATCATGGT TTGGGGGCGG AACAGGTTGG AACTGGCTGA CGACTATTTC GATGTATTTG CAGCCGGGAC AGCCGCTTTA TGTGTTACTC TATGCGTCTG CAATCATCTT CTTCTGTTTC TTCTACACGG CGTTAGTGTT CAACCCGCGT GAAACAGCAG ATAACCTGAA GAAGTCCGGT GCATTCGTGC CAGGAATTCG TCCGGGAGAG CAAACGGCGA AGTACATCGA TAAAGTAATG ACACGTCTAA CCTTAATTGG TGCGATGTAT ATTACTTTCA TCTGCCTGAT CCCGGAGTTC ATGCGTGACG CGATGAAAGT ACCATTTTAC TTTGGTGGTA CCTCCCTACT TATTGTAGTG GTGGTCATCA TGGACTTTAT GGCTCAAGTG CAAACTCTGA TGATGTCTAG TCAGTATGAG TCTGCATTGA AGAAAGCAAA CCTGAAAGGC TATAACCGCT AA
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Protein sequence | MAKQPGLDFQ SAKGGLGELK RRLLFVIGAL IVFRIGSFIP IPGIDATVLA KLLEQQRGTI IEMFNMFSGG ALSRASIFAL GIMPYISASI IIQLLTVVHP ALAEIKKEGE AGRRKISQYT RYGTLVLAIF QSIGIATGLP NMPGMQGLVI NPGFAFYFTA VVSLVTGTMF LMWLGEQITE RGIGNGISII IFAGIVAGLP PAIAHTIEQA RQGDLHFLLL LLVAVLVFAV TFFVVFIERG QRRIVVNYAK RQQGRRVYAA QSTHLPLKVN MAGVIPAIFA SSIILFPATI ASWFGGGTGW NWLTTISMYL QPGQPLYVLL YASAIIFFCF FYTALVFNPR ETADNLKKSG AFVPGIRPGE QTAKYIDKVM TRLTLIGAMY ITFICLIPEF MRDAMKVPFY FGGTSLLIVV VVIMDFMAQV QTLMMSSQYE SALKKANLKG YNR
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