Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A0552 |
Symbol | rarD |
ID | 5799015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 573489 |
End bp | 574379 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641338557 |
Product | hypothetical protein |
Protein accession | YP_001605145 |
Protein GI | 162418853 |
COG category | [R] General function prediction only |
COG ID | [COG2962] Predicted permeases |
TIGRFAM ID | [TIGR00688] rarD protein |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAAAC AACAAACTCG TCAGGGCATT TTTTTTGCTC TGGCTGCCTA TTTTATTTGG GGCCTTGCTC CCGCGTATTT CAAACTCATC CAACAAGTGC CCGCTGATGA GATTCTGACC CACAGGGTCA TCTGGTCATT CTTCTTTATG TTGATTCTGC TTACCGTCAG CCGCCATTGG CCACAGGTGC GCGACGCCTG CAAAAACCGT AAGCGCCTAT TGTTACTGGC GGTGACCGCC GTTTTGATTG CCAGTAACTG GCTGCTGTTT ATCTGGGCGG TCAACCACAA TCACATGCTG GAAGCCAGTC TGGGATATTT CATTAATCCG TTGGTCAATG TGCTGTTTGG CATGTTATTT CTCGGCGAAC GCTTTCGTCG TATGCAATGG GTCGCCGTGG CACTCGCCTT TGCCGGCGTG CTGATTCAAC TGTGGCAATT TGGTTCACTG CCAGTGATTG GGCTGGGTCT GGCCATCACC TTTGCTTTAT ACGGCTTGTT GCGTAAAAAG CTGGGCGTTG ATGCCCAAAC CGGTATGCTC ATTGAAACCA TGTGGCTGCT ACCAGTAGCC GCCGTATATC TGTTTTTCAT CGCCGACAGC CCGACCAGCC ACCTGAGCGC CAATGCCTGG TCGCTGAACC TGCTGCTAGC CGCTGCGGGC GTCATTACCA CAATCCCACT GCTGTTCTTC ACCGCGGCGG CCACCCGTTT GCGTCTTTCG ACACTGGGTT TCTTCCAGTA TCTTGGGCCA ACATTGATGT TTATTTTGGC GGTGACGTTC TACGGTGAAA CCATTGGTAA TGACAAGATG GTGACCTTCA TCTTTATCTG GGCGGCCCTG CTACTGTTTA CGCTGGATGC ACTCTATACC CAACGCAAAC TACGCCGGTA A
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Protein sequence | MDKQQTRQGI FFALAAYFIW GLAPAYFKLI QQVPADEILT HRVIWSFFFM LILLTVSRHW PQVRDACKNR KRLLLLAVTA VLIASNWLLF IWAVNHNHML EASLGYFINP LVNVLFGMLF LGERFRRMQW VAVALAFAGV LIQLWQFGSL PVIGLGLAIT FALYGLLRKK LGVDAQTGML IETMWLLPVA AVYLFFIADS PTSHLSANAW SLNLLLAAAG VITTIPLLFF TAAATRLRLS TLGFFQYLGP TLMFILAVTF YGETIGNDKM VTFIFIWAAL LLFTLDALYT QRKLRR
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