Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A0536 |
Symbol | hemC |
ID | 5798999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 557223 |
End bp | 558164 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641338541 |
Product | porphobilinogen deaminase |
Protein accession | YP_001605129 |
Protein GI | 162419364 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0181] Porphobilinogen deaminase |
TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAGACA AAATTATTCG AATTGCCACA CGACAAAGCC CGCTCGCCTT ATGGCAAGCA CATTATGTTC AACATTTATT GCAAGCCAAT CACCCTGGTC TGCAAATCGA ACTGGTCCCA ATGGTCACCC GTGGGGATAT CATTTTGGAT ACACCATTGG CCAAAGTCGG TGGTAAGGGT TTATTTGTCA AAGAATTAGA GCTGGCGCTG CTGGACGGCA GAGCTGATAT TGCCGTGCAT TCGATGAAAG ATGTGCCCAT TGCTTTCCCC GAAGGGCTGG GTTTAGTCAC GATTTGTGAA CGTGAAGACC CGCGCGATGC TTTCGTCTCG TCACATTATG CCCATCTGGA TGATCTCCCT GCAGGCAGTG TTGTCGGTAC CTCCAGCCTG CGCCGCCAGT GTCAGCTACG CGAACGGCGA CCAGACCTGA TTATCCGCGA TCTACGGGGC AACGTCGGTA CCCGCCTTGC CAAACTGGAT AATGGTGACT ATCAGGCTAT TATTCTGGCT GTCGCGGGTC TCAAGCGCCT CGGTCTGGAA AACCGAATTC GCTATGCCAT GTCAGCGGAG GAGTCCCTCC CGGCTGTCGG CCAAGGTGCC GTAGGTATCG AATGCCGTCT GGATGATGAC CATACCCGCC AGTTGCTGGC TCCGTTGAAC CATCGGCACA CCGAATTACG GGTCTGTGCG GAGCGGGCAA TGAATATTCG CCTTGAAGGG GGTTGCCAAG TCCCGATCGG TAGCTACGCT GAACTGGAAG GTGATACTTT ATGGCTACGG GCGCTGGTGG GAGCACCTGA TGGCAGCCAA ATGATCCGGG GTGAACGCCG TGGTCCGGCG GCAGAGGCTG AGCAGATGGG CATTGAACTT GCCGATGAGT TGCTATCACT CGGCGCACGA GAAATCCTGG CGGCGGTTTA TCTGGATAAT CCTGCGCGAT GA
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Protein sequence | MLDKIIRIAT RQSPLALWQA HYVQHLLQAN HPGLQIELVP MVTRGDIILD TPLAKVGGKG LFVKELELAL LDGRADIAVH SMKDVPIAFP EGLGLVTICE REDPRDAFVS SHYAHLDDLP AGSVVGTSSL RRQCQLRERR PDLIIRDLRG NVGTRLAKLD NGDYQAIILA VAGLKRLGLE NRIRYAMSAE ESLPAVGQGA VGIECRLDDD HTRQLLAPLN HRHTELRVCA ERAMNIRLEG GCQVPIGSYA ELEGDTLWLR ALVGAPDGSQ MIRGERRGPA AEAEQMGIEL ADELLSLGAR EILAAVYLDN PAR
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