Gene YpAngola_A0504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A0504 
Symbol 
ID5798967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp526069 
End bp526860 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content34% 
IMG OID641338509 
Producthypothetical protein 
Protein accessionYP_001605101 
Protein GI162420475 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3823] Glutamine cyclotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000894372 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.00102967 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAGATAT TAAATATACC TCGCCGTTGC TTTACTTTTT TATTAATTAT AATCACATAT 
AGCTTTCCTT TATCTTTCGC AGATTCTAAA CCTCTGAAGT ATACCTTTGA AGTGATAAGA
AAAATTCCGC ATGATGAAAC ATCTTTTACG CAAGGGCTTG TCATTGATGA CGGTAAATTA
TATGAAACGA CCGGCCTCTA TAAAAACTCT AAAATCAGGG AGTTAGACTT AACCAATGGT
AAGGTCATTA GGTCAGTGAA TTTACCAGAT AATATTTTTG GTGAAGGGAT CACTAAATTA
GGTGATAGTT TCTACGTATT AACCTGGAAA GAAAAAAAAG CATTTGTCAT TAACCCTAAT
GATTTGAAAA TTATAAAAAC ATTCAATTAT GAAGGAGAAG GATGGGGGTT AACGACCGAT
GGTATCAATC TCATTATGGG GGATGGGAGC GATACTCTTT ATTTTCGTAA CCCAGCAGAT
TTCTCAATTA TAAAAAAAAT ATCAGTGACC TTTGATGGCC GAAGAATTGA AAAAATTAAT
GAGCTAGAAT GGATTGATGG AATGATTTAT GCCAACGTAT GGTATAGCGA TGCTATATTA
GTGATTGAAC CTGAAAATGG TAGAGTGGTT AAGTGGATTG AGTTGTCAGG GCTACAATTC
ATGCTCGATT CAGTCAACCG TAACACTAAT ACACTCAATG GTATTGCTTA CGATAAAAGC
AAAAATAAAA TATACCTCAC TGGAAAAAAC TGGTCCAACA TCTTTGAAGT GAAATTTTTA
ACATCCAAAT GA
 
Protein sequence
MEILNIPRRC FTFLLIIITY SFPLSFADSK PLKYTFEVIR KIPHDETSFT QGLVIDDGKL 
YETTGLYKNS KIRELDLTNG KVIRSVNLPD NIFGEGITKL GDSFYVLTWK EKKAFVINPN
DLKIIKTFNY EGEGWGLTTD GINLIMGDGS DTLYFRNPAD FSIIKKISVT FDGRRIEKIN
ELEWIDGMIY ANVWYSDAIL VIEPENGRVV KWIELSGLQF MLDSVNRNTN TLNGIAYDKS
KNKIYLTGKN WSNIFEVKFL TSK