Gene YpAngola_A0415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A0415 
Symbol 
ID5798879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp430271 
End bp431452 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content50% 
IMG OID641338422 
Productouter membrane protein assembly complex subunit YfgL 
Protein accessionYP_001605021 
Protein GI162420773 
COG category[S] Function unknown 
COG ID[COG1520] FOG: WD40-like repeat 
TIGRFAM ID[TIGR03300] outer membrane assembly lipoprotein YfgL 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.873233 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.00131878 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAATTGC GTAAAACACT CTTAGTAGGA CTGGTATCTG TTGCCCTATT GAGTGGTTGC 
TCACTGTTTA ACAGTGAAGA AGATGTGGTT ACCATGTCGC CACTGCCAAA GGTTGAAAAT
CAATTCTCAC CAACTAAGGT GTGGAGCACC TCTGTTGGGA GCGGTGTTGG TGATTATTAC
TCCCATTTGC GCCCAGCATG GCAGGGGACT TCCGTATTTG CTGCCGATCG CAAAGGTTTA
GTGAAAGCCA TGGATGCAGA CACCGGTAAG CAAATCTGGC AAACCGACCT GTCTGAAAAA
ACGAACTTTC TCTCCAGCAA CCATTCTGCG ATGTTATCTG GTGGCGTAAC AGCTTCAGGT
TCGCATGTTT ATGTTGGCAG TGAAAAAGCG GTGGTTTACG CGCTTAATGC CTATGATGGT
CAGGTTGCAT GGCAGACGGT CGTTGCGGGT GAGGCGTTGT CCCGTCCTGT GGTGAGCGAT
GGCGTAGTAC TGATCCACAC ATCAAATGGT ATGCTGCAAG CGCTGAATGA GTCTGACGGT
GCTATCAAGT GGACACTAAA TCTGGATACG CCTGCATTGT CTCTGCGTGG TGAGTCAGCC
CCTGCGGTTG CATTTGGTGC AGCGATTGTC GGTGGTGACA ATGGCCGGGT CAGTGCAGTG
ATGATGGAAC AGGGTCAGTT GATCTGGCAA CAACGTATCT CACAAGTGAC CGGTGCTACT
GAAATTGACC GCTTGAATGA TATCGATATC ACGCCTGTCG TGGTTGACGG TGTGGTTTAT
GCGTTGGCTT ATAACGGTAA TCTAACCGCC TTGGATTTGC GTTCCGGCCA GATCCTGTGG
AAGCGCGAGA TAGGCTCCGT GAATGACTTT ATTGTTGACG CTGGGCGCAT TTATCTCGTT
GATCAAAATG ACCGTATAAT CGCGCTGAAG TCTGATGGCG GCGTAACGCT TTGGAGTCAA
AGCGATTTAT TGCATCGTAA CTTGACCGCT CCAGTGATGT ATAATGGCTA TCTGGTCGTA
GGTGATGCCG AAGGTTATCT GCACTGGGTG AATACCGATG ATGGCCGTTT TGTTGCTCAA
CAGAGCGTGG ACAGCTCAGG TTTCCTGAGT GCGCCAGTGG TTGCCAGCGA TAAGCTGTTG
ATTCAGGCAA GAAGCGGTAC GGTATACGCG TTCACCCGTT AA
 
Protein sequence
MQLRKTLLVG LVSVALLSGC SLFNSEEDVV TMSPLPKVEN QFSPTKVWST SVGSGVGDYY 
SHLRPAWQGT SVFAADRKGL VKAMDADTGK QIWQTDLSEK TNFLSSNHSA MLSGGVTASG
SHVYVGSEKA VVYALNAYDG QVAWQTVVAG EALSRPVVSD GVVLIHTSNG MLQALNESDG
AIKWTLNLDT PALSLRGESA PAVAFGAAIV GGDNGRVSAV MMEQGQLIWQ QRISQVTGAT
EIDRLNDIDI TPVVVDGVVY ALAYNGNLTA LDLRSGQILW KREIGSVNDF IVDAGRIYLV
DQNDRIIALK SDGGVTLWSQ SDLLHRNLTA PVMYNGYLVV GDAEGYLHWV NTDDGRFVAQ
QSVDSSGFLS APVVASDKLL IQARSGTVYA FTR