Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A0406 |
Symbol | |
ID | 5798870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 420721 |
End bp | 421200 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641338413 |
Product | hypothetical protein |
Protein accession | YP_001605012 |
Protein GI | 162420186 |
COG category | [S] Function unknown |
COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0000191771 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0000230132 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTAACT TAATTTATGC AAGTATTGAT GGCGAAAAAC AAGGGTTGAT ATCGTCTGGC TGCTCAACGC TTGACTCTAT TGGTAATCGA TGTCAGTTGG GGCATGAGGA TCAAATATAT GTCTATGGGT TTGATCATAA TATAGCCAGA GCACAAAATG TCGCGCATCA GCCAATCATA ATAACCAAAC CCATTGACAA ATCATCGCCT TTACTAGGGA TGTCTATATC AAATAATGAA AAACTACAAA TAGTATTATA TATGTACAGG ATAAATTCAT CGGGTTCCTT AGAGGTGTTT TATACAATAA AACTGAAAGA TGCCTATATC TCAAATATTT CTCAACATTG CCCAAATGCG CTGACACATA ATGATATTCA GCCCTATGAA ATCATATCAA TTTCGTACAA AAGCATTGAT TGGGAGCACA ATATTTCTGG GACATCTGGC TATAGCATAT GGGATGAAAG AGTTTATTGA
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Protein sequence | MANLIYASID GEKQGLISSG CSTLDSIGNR CQLGHEDQIY VYGFDHNIAR AQNVAHQPII ITKPIDKSSP LLGMSISNNE KLQIVLYMYR INSSGSLEVF YTIKLKDAYI SNISQHCPNA LTHNDIQPYE IISISYKSID WEHNISGTSG YSIWDERVY
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