Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A0339 |
Symbol | nagE |
ID | 5798803 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 353355 |
End bp | 355388 |
Gene Length | 2034 bp |
Protein Length | 677 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641338347 |
Product | PTS system N-acetylgalactosamine-specific transporter subunit IIABC |
Protein accession | YP_001604947 |
Protein GI | 162419497 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific [COG1264] Phosphotransferase system IIB components [COG2190] Phosphotransferase system IIA components |
TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component [TIGR00830] PTS system, glucose subfamily, IIA component [TIGR01998] PTS system, N-acetylglucosamine-specific IIBC component |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.210629 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTATTC TTGGTTACTT ACAAAAAGTA GGTCGAGCGT TGATGGTCCC TGTGGCCACA CTGCCTGCGG CCGCGATATT GATGGGTGTA GGCTACTGGA TAGACCCAGT CGGTTGGGGG GCTGATAATG CACTGGCGGC ATTATTCATC AAATCTGGTG CTGCAATAAT CGAAAACATG TCGGTACTGT TCGCAATTGG TGTTGCTTAC GGTATGTCAA AAGATAAAGA CGGTGCTGCG GCACTGACCG GTTTTGTCGG TTTCCTGGTA TTAACCACGC TGTGTTCGCC AGCAGCGGTT TCGATGATCA AACAGATTCC ACTTGATCAA GTCCCTGCCG CATTTGGCAA AATCGAAAAC CAGTTCGTGG GTATTTTGGT CGGTATTATC TCTGCTGAGC TTTATAACCG TTTCAGCGGC GTTGAACTGC CAAAAGCGCT CTCTTTCTTC AGTGGTCGTC GTTTGGTTCC AATCTTGACG TCCTTCCTGA TGATCGCAGT GGCCTTTATG CTGATGTACA TATGGCCACT GATTTATAAC GCATTAGTGA CCTTCGGTGA ATACATCAAA GATCTGGGTT CTGTTGGTGC GGGTATCTAT GCTTTCTTCA ACCGCTTACT GATCCCTGTT GGTCTGCATC ACGCTCTGAA CTCGGTGTTC TGGTTTGACG TCGCTGGGAT TAACGATATT CCTAACTTCC TCGGCGGCCA AGAATCGATC AATAAAGGCA CCGGCATTGT CGGTATCACT GGCCGTTATC AGGCAGGTTT CTTCCCGATT ATGATGTTTG GTTTACCGGG TGCTGCGTTG GCAATTTACC ACTGCGCACG TCCAGAAAAT AAAGCAAAAG TGGCGGGTAT CATGATGGCG GGGGCATTTG CAGCCTTCTT CACAGGTATC ACTGAGCCTC TTGAATTCTC CTTCATGTTT GTGGCACCTG TGCTGTACTT CTTGCACGCC GTGTTGACCG GTATTTCCGT ATTCATCGCC GCCAGCATGC ATTGGATCGC GGGCTTTGGT TTCAGTGCCG GTTTAGTGGA TATGGTGCTC TCTTCCCGTA ACCCGTTGGC TACGCAATGG TACATGCTGA TCCCACAAGG TCTGATATTC TTTGTGATTT ACTACTTAGT ATTCCGTTTC ACTATCCAGA AATTCAACTT ATTGACACCT GGCCGTGAGC TGGCGGTGGA AGGCAGTGAA GAAGATGGTT ACGACGTAAA TGTTGATAAA ACGCCAGCAG TGAATGAAAG TGAAATCAAT AGCCTTGCTC GTCGCTATAT TGGTGCCATC GGTGGTTCAG ACAACCTGAC GGCCATTGAT GCCTGCATTA CCCGCCTACG CCTGAATGTT AAAGATTCAG CCTTGGTTAA TGACAGTGTA GCCAAACGCT TAGGGGCCTC TGGTGTTATT CGTCTGAATA AGCAAAGTGT ACAAATTATC GTTGGTACTC GCGCAGAACT GATTGCCGCA GCAATGCGCA CGGTGCTGGC GGGTGGCCCA ATCCCCGCGG CAAGCAGCAA TGCTGCGCCT ACGGGTGCAA GACCGCAGGC GGTCATTAAC ACCGCGAAAA CGGCTTCTTT AGTTCTGGTT TCGCCAATTA CCGGTGATGT TGTGCCATTG GCGCAGGTTC CTGATGAGGC TTTTGCTAGC AAAGCGGTAG GTGAGGGGGT TGCTATCCGT CCTACAGACA AAATAGTTGT TTCTCCCGCT AGCGGCACTA TTGTGAAAAT CTTCAATACG GATCATGCGT TCTGCCTGGA AACGGAAACC GGTGCTGAGA TTGTGGTTCA TATCGGGATT GATACCGTGA AGCTTAACGG CCAGGGCTTT ACCCGTTTAG TTGAAGAGGG GACGACAGTG GTTGCTGGTC AGCCGGTGTT AGAACTGGAT CTGGCTTATC TGAATGCCAA CGCGCATTCA ATGATCAGCC CAGTTGTCGT CAGTAATATT GATGACTACG CGGGGATCTC GCTGTTGGCG AGCGGTTCAG TCGTTGCCGG TCAAAGCCAA TTATTTGAGA TTCGTGGCAA ATAA
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Protein sequence | MSILGYLQKV GRALMVPVAT LPAAAILMGV GYWIDPVGWG ADNALAALFI KSGAAIIENM SVLFAIGVAY GMSKDKDGAA ALTGFVGFLV LTTLCSPAAV SMIKQIPLDQ VPAAFGKIEN QFVGILVGII SAELYNRFSG VELPKALSFF SGRRLVPILT SFLMIAVAFM LMYIWPLIYN ALVTFGEYIK DLGSVGAGIY AFFNRLLIPV GLHHALNSVF WFDVAGINDI PNFLGGQESI NKGTGIVGIT GRYQAGFFPI MMFGLPGAAL AIYHCARPEN KAKVAGIMMA GAFAAFFTGI TEPLEFSFMF VAPVLYFLHA VLTGISVFIA ASMHWIAGFG FSAGLVDMVL SSRNPLATQW YMLIPQGLIF FVIYYLVFRF TIQKFNLLTP GRELAVEGSE EDGYDVNVDK TPAVNESEIN SLARRYIGAI GGSDNLTAID ACITRLRLNV KDSALVNDSV AKRLGASGVI RLNKQSVQII VGTRAELIAA AMRTVLAGGP IPAASSNAAP TGARPQAVIN TAKTASLVLV SPITGDVVPL AQVPDEAFAS KAVGEGVAIR PTDKIVVSPA SGTIVKIFNT DHAFCLETET GAEIVVHIGI DTVKLNGQGF TRLVEEGTTV VAGQPVLELD LAYLNANAHS MISPVVVSNI DDYAGISLLA SGSVVAGQSQ LFEIRGK
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