Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A0335 |
Symbol | nagD |
ID | 5798799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 348928 |
End bp | 349674 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641338343 |
Product | UMP phosphatase |
Protein accession | YP_001604943 |
Protein GI | 162419319 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
TIGRFAM ID | [TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00626353 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAATCA AAAGCGTTAT TTGCGATATC GATGGGGTGT TATTACATGA CAACACCGCC ATTAAGGGCG CCAATGACTT TTTAGCCCGT ATTCAGGATG CTGGAATGCC ATTGGTGATC CTAACCAACT ACCCATCCCA GACGGCGCAA GATCTGACTA ACCGCTTTAT CACTGCCGGG CTTGATGTGC CGGAAAGCGC GTTTTATACC TCAGCCATGG CAACGGCCGA CTTTTTACGC CGTCAGGATG GCAAAAAAGC CTATGTTATT GGCGAGGGTG CTTTAGTTCA CGAACTCTAT AAAGCTGGCT TTACCATCAC CGATATCAAT CCTGATTTTG TTATTGTCGG TGAGACGCGT TCTTATAACT GGGACATGAT GCATAAAGCA GCCTATTTTG TTGCCAATGG TGCACGTTTT ATTGCCACTA ACCCGGACTG CCACGGCTTC GCCCCAGCCT GTGGTGCTCT GTGCGCACCT ATTGAAAAAA TATCAGGCCG CAAACCGTTT TATGTCGGTA AGCCAAGTCC ATGGATCATC CGTGCGGCGC TGAATAAAAT GCAGGCGCAT TCCGAAAGCA CCGTGATTGT CGGCGATAAC TTACGTACTG ATATTTTAGC GGGCTTCCAG GCCGGTCTGG AGACGATTCT GGTCTTATCC GGTGTCTCAA CCCTTACTGA TATCGACGCC ATGCCGTTCC GTCCAAGCTA CGTTTACCCC TCGGTTGCCG ACATCGATAT TATCTAA
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Protein sequence | MTIKSVICDI DGVLLHDNTA IKGANDFLAR IQDAGMPLVI LTNYPSQTAQ DLTNRFITAG LDVPESAFYT SAMATADFLR RQDGKKAYVI GEGALVHELY KAGFTITDIN PDFVIVGETR SYNWDMMHKA AYFVANGARF IATNPDCHGF APACGALCAP IEKISGRKPF YVGKPSPWII RAALNKMQAH SESTVIVGDN LRTDILAGFQ AGLETILVLS GVSTLTDIDA MPFRPSYVYP SVADIDII
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