Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A0260 |
Symbol | |
ID | 5798724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 270437 |
End bp | 271723 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641338272 |
Product | type II/IV secretion system protein |
Protein accession | YP_001604878 |
Protein GI | 162418353 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0000662566 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0000000763288 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATTGTCC CTTTAAAAAT ACAAGAGTTA ATGCGCGAAA GAATGTTAGC CAATATTGAC ATTAATAAAG TTGAACTCCT GGTTGGTGAT CGTAACAAAC TCATCGGATT GCTCTCTCAA ACATTCGATG ATTTATTTAA TAACAATGAA TATAACTTAA CGACTCAAGC ACAAAAATAT ATTATTGAAA TGATAGCTGA TGAAATAACC GGCTTTGGCC CATTAAGAGA ACTTATGGAG GATGATTCCA TTAGTGATAT TATGGTCAAC GGCCCAGAAA GGATATTCAT CGAAAGATAT GGCCTGTTAA AATTAACTGA CCGGCGGTTT GTTAATAATA CTCAACTCAC CGATATCGCA AAGCGTTTAA TGCAAAAGGT TAATCGACGC ATTGATGAAG GCCGCCCATT AGCAGATGCC CGTTTAATCG ATGGTAGCCG AATAAACGTC GCGATCAGCC CCATTGCTTT AGATGGTACC GCCCTTTCTA TCCGTAAATT CAGTAAAAAT AAACGGAGAT TAGAAGATTT GGTCGATATG GGAGCCATGA GTAGTGATAT GGCAAATTTC CTAATTATTG CTGCCAGTTG CCGCGTAAAT ATTATTATTT CCGGAGGTAC AGGCTCAGGG AAAACCACGC TATTGAATGC GCTTTCAAAA TATATTTCAG AAGATGAGCG GGTGATAACA CTCGAAGATG CTGCGGAACT GAATCTGGAG CAGCCCCATG TGGTCAGGAT GGAAACCCGT CTGGCGGGGC TGGAGAATAC CGGCCAGATA ACCATGCGCG ATCTGGTGAT TAACTCCCTG CGTATGCGCC CTGACAGGAT CATTATTGGT GAGTGCCGGG GTGAGGAAAC CTTTGAAATG TTACAGGCGA TGAACACTGG CCATAACGGT TCAATGTCCA CCCTACATGC CAATACTCCC CGTGATGCTG TTGCCCGTTT AGAAAGCATG ATTATGATGG GGCCGGTTAA TATGCCTCTC ATTACCATCC GCCGTAATAT TGCATCTGCA ATTAATCTTA TTGTCCAAGT CTCACGTATG AATGATGGCT CGCGAAAAAT TCGCAATATC AGCGAGATCA TGGGAATGGA AGGTGAACAT GTTGTTTTGC AAGATATATT TACTTTCCAA CCCGCCAGTA CTCGTGATGA TCAAGGGCGT ATTCAGGGTG AGTTTATCAA CCATGGGCTA TTTAATCGGT CATCAGTCAG AATAAACGCC GATATCCACA ATCTGGCCAA TGAGTTAAAC AGTGTTTTCT CTACGGTGAG CAAATGA
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Protein sequence | MIVPLKIQEL MRERMLANID INKVELLVGD RNKLIGLLSQ TFDDLFNNNE YNLTTQAQKY IIEMIADEIT GFGPLRELME DDSISDIMVN GPERIFIERY GLLKLTDRRF VNNTQLTDIA KRLMQKVNRR IDEGRPLADA RLIDGSRINV AISPIALDGT ALSIRKFSKN KRRLEDLVDM GAMSSDMANF LIIAASCRVN IIISGGTGSG KTTLLNALSK YISEDERVIT LEDAAELNLE QPHVVRMETR LAGLENTGQI TMRDLVINSL RMRPDRIIIG ECRGEETFEM LQAMNTGHNG SMSTLHANTP RDAVARLESM IMMGPVNMPL ITIRRNIASA INLIVQVSRM NDGSRKIRNI SEIMGMEGEH VVLQDIFTFQ PASTRDDQGR IQGEFINHGL FNRSSVRINA DIHNLANELN SVFSTVSK
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