Gene YpAngola_A0175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A0175 
Symbol 
ID5798639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp186018 
End bp187556 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content55% 
IMG OID641338196 
Producthypothetical protein 
Protein accessionYP_001604802 
Protein GI162418479 
COG category[S] Function unknown 
COG ID[COG3517] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03355] type VI secretion protein, EvpB/VC_A0108 family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.653266 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value1.00045e-06 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTGTAC AGGAAAACCG TGCGCAGGGT ACTGCGACGA CCGTATTAAA GAATAGCCCT 
GCGGCACAAG GGGTTTACGC CGCCTTGTTT GAAAAAATCA ACCTGAGCCC GGTCTCCTCA
CTGGCCGGTA TCGAGGCGTT CCAGAACAAC GATGCGCTGG CGGAAGCCAC CACCGATGAG
CGCGTTACCG CCGCCGTCAG TGTCTTTTTA GACCTGCTGA AGCAGTCGGC GAAGAAAGTA
GAAAAACTGG ATAAAACCCT GCTGGACGGC CATATTGCCG CACTGGATGA CCAAATCAGC
CGCCAGTTGG ACGCGGTAAT GCACCACCCC GATTTCCAGC GGGTGGAATC GACCTGGCGT
GGTGTGAAGT CGCTGATCGA TCAGACCGAT TTCCGCCAGA ACGTGCGCAT CGAGCTGCTG
GATATCAGTA AAGATCATCT GGTGCAGGAT TTTGAAGATG CCCCGGAAAT CTCACAAAGC
GGTTTATACG CCCAGACCTA TATTCAGGAA TACGACCCCC CCGGCGGCGA GCCGATTGCC
GCGGCTATCT CCAACTACGA GTTCGACCGT AGCCCGCAAG ATATCGCGTT ATTGCGCAAT
ATCTCCAAGG TCGCGGCGGC AGCCCATATG CCGTTTATCG GTTCCGTTGG CCCCGAGTTC
TTTGGTAAAG AGAACATGGA AGACGTGGCA GCCATCAAAG ATATCGCCAA CTACTTTGAC
CGTGCTGAAT ACATCAAGTG GAAAGCCTTC CGCGACTCGG ATGATTCCCG CTATATCGGC
CTGACCATGC CGCGCGTGCT GGGGCGTTTG CCTTACGGCC CGGACACGGT GCCGGTACGC
AGCTTCAACT ACGTTGAGCA GGTGAAAGGG CCGGATCATG ATCGCTACTT GTGGACCAAT
GCCTCATTTG CCTTTGCTGC TAACATGGTG AAAAGCTTCA TTAAAAATGG CTGGTGTGTG
CAGATCCGGG GCCCGCAGGC CGGTGGTGCG GTCACCAACT TACCGATCCA CCTGTACGAT
CTGGGTACCG GTAATCAGGT CAAAATTCCG TCAGAGGTGA TGATCCCGGA AACCCGCGAG
TTCGAGTTTG CCAATCTGGG CTTTATCCCG CTGTCGTACT ACAAAAACCG CGATTACTCG
TGCTTCTTCT CGGCCAACTC GGCGCAGAAA CCGGCGCTGT ATGACACCGC GGATGCCACG
GCCAACAGCC GCATCAACGC CCGTTTGCCG TATATCTTCC TGCTGTCGCG CATTGCCCAT
TATCTGAAAC TGATCCAGCG CGAGAACATC GGCACCACCA AAGATCGCCG TCTGCTGGAG
CTGAACAACT GGGTGCGCGG GCTGGTGACG GAAATGACTG ATCCGGGTGA TGATTTGCAG
GCGTCCCATC CCCTGCGTGA TGCCAAAGTG ACGGTCGAAG ATATCGAAGA CAACCCCGGC
TTCTTCCGCG TCAAGCTGTA TGCGGTGCCG CATTTCCAGG TGGAAGGGAT GGACGTCAAT
CTGTCATTGG TTTCCCAAAT GCCGAAGGCT AAGGCATAA
 
Protein sequence
MSVQENRAQG TATTVLKNSP AAQGVYAALF EKINLSPVSS LAGIEAFQNN DALAEATTDE 
RVTAAVSVFL DLLKQSAKKV EKLDKTLLDG HIAALDDQIS RQLDAVMHHP DFQRVESTWR
GVKSLIDQTD FRQNVRIELL DISKDHLVQD FEDAPEISQS GLYAQTYIQE YDPPGGEPIA
AAISNYEFDR SPQDIALLRN ISKVAAAAHM PFIGSVGPEF FGKENMEDVA AIKDIANYFD
RAEYIKWKAF RDSDDSRYIG LTMPRVLGRL PYGPDTVPVR SFNYVEQVKG PDHDRYLWTN
ASFAFAANMV KSFIKNGWCV QIRGPQAGGA VTNLPIHLYD LGTGNQVKIP SEVMIPETRE
FEFANLGFIP LSYYKNRDYS CFFSANSAQK PALYDTADAT ANSRINARLP YIFLLSRIAH
YLKLIQRENI GTTKDRRLLE LNNWVRGLVT EMTDPGDDLQ ASHPLRDAKV TVEDIEDNPG
FFRVKLYAVP HFQVEGMDVN LSLVSQMPKA KA