Gene YpAngola_A0061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A0061 
SymbolkdtA 
ID5798526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp65696 
End bp66973 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content51% 
IMG OID641338089 
Product3-deoxy-D-manno-octulosonic-acid transferase 
Protein accessionYP_001604701 
Protein GI162420891 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1519] 3-deoxy-D-manno-octulosonic-acid transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00193411 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCTGC GTTTATACCA GGTATTACTC TACCTTATTC AACCTCTGAT TTGGCTGCGT 
TTACTATTAC GTAGCCGTAA AGCCCCCGCT TATCGCAAGC GTTGGGGGGA ACGCTATGGT
TTTTGTGCCG GTAAAGTCGT TGCTGGCGGT ATCATGCTGC ATTCCGTTTC AGTCGGGGAA
ACACTGGCTG CAATCCCATT GGTCAGAGCA TTACGCCACC GTTACCCGTC GCTGCCTATC
ACGGTGACCA CGATGACGCC TACCGGCTCA GAGCGCGTCC AGTCTGCTTT TGGTAAAGAT
GTTCACCACG TTTATTTACC TTATGATCTC CCCGGCTCTG TGAACCGTTT CCTTGACCAG
GTCAATCCCA AACTGGTTAT CATCATGGAA ACTGAACTTT GGCCTAACCT GATCAACACT
CTGCATCGCC GTAAGATCCC ACTGGTTATT GCCAATGCAC GTCTTTCTGC CCGCTCTGCG
GCAGGTTACA AGAAGATCGG TAGTTTTATC CGCACTATAC TGCAACGGAT CACGTTGATT
GCGGCACAGA ACCAAGAGGA TGGTGACCGC TTCATCGAAC TGGGGCTTAA ACGTTCCCAG
CTCACCGTGA CGGGTAGTCT GAAGTTTGAT ATTTCTGTCA CACCGGAGTT GGCAGCCAGA
GCGGTGACAT TACGCCGCCA ATGGGCACCG CACCGCCCCG TTTGGATTGC GACTAGCACA
CATGACGGTG AAGAAACTAT CTTGTTGGAA GCCCATCGGC AGCTATTACA ACAGTTCCCA
ACATTGCTAC TGATCCTGGT ACCTCGCCAT CCTGAACGCT TCGGAAAGGC CGTTGAATTA
ACACAAAAGA TAGGCTTGAG TTATACATTA CGTAGTAAAG GTGAAGTGCC CTCGAGTAGC
ACCCAAGTCG TTATCGGCGA CACGATGGGT GAGCTGATGC TGCTGTACGG TATTGCCGAC
CTGGCCTTTG TTGGCGGTAG TTTGGTTGAA CGTGGCGGTC ATAACCCACT GGAAGCAGCG
GCTCATGCTA TTCCCGTGTT GATGGGCCCA CATACCTTTA ACTTTAAAGA TATTTGCGCC
AAGCTGGAGC AGGCTGAAGG GTTAATTACC GTGACTGATA CTCTATCGCT GGTAAAAGAA
ATCACGGTGT TACTGACTGA TGAAGATTGC CGCCTCTACT ATGGCCGCCA CGCGGTTGAT
GTCTTACATG AAAATCAGGG CGCATTACAG CGGTTATTAC ATTTGTTGGA GCCTTATCTG
CCACAACGGA GCCACTAA
 
Protein sequence
MLLRLYQVLL YLIQPLIWLR LLLRSRKAPA YRKRWGERYG FCAGKVVAGG IMLHSVSVGE 
TLAAIPLVRA LRHRYPSLPI TVTTMTPTGS ERVQSAFGKD VHHVYLPYDL PGSVNRFLDQ
VNPKLVIIME TELWPNLINT LHRRKIPLVI ANARLSARSA AGYKKIGSFI RTILQRITLI
AAQNQEDGDR FIELGLKRSQ LTVTGSLKFD ISVTPELAAR AVTLRRQWAP HRPVWIATST
HDGEETILLE AHRQLLQQFP TLLLILVPRH PERFGKAVEL TQKIGLSYTL RSKGEVPSSS
TQVVIGDTMG ELMLLYGIAD LAFVGGSLVE RGGHNPLEAA AHAIPVLMGP HTFNFKDICA
KLEQAEGLIT VTDTLSLVKE ITVLLTDEDC RLYYGRHAVD VLHENQGALQ RLLHLLEPYL
PQRSH