Gene YpAngola_A0055 details

Gene Information

• Locus tag: YpAngola_A0055
• Symbol: radC
• ID: 5798520
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pestis Angola
• Kingdom: Bacteria
• Replicon accession: NC_010159
• Strand: +
• Start bp: 62193
• End bp: 62861
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 641338083
• Product: DNA repair protein RadC
• Protein accession: YP_001604695
• Protein GI: 162421088
• COG category: [L] Replication, recombination and repair
• COG ID: [COG2003] DNA repair proteins
• TIGRFAM ID: [TIGR00608] DNA repair protein radc

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.00110117
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: 81
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGATGAGT GGTATGGGCA GGTGGCCCCA AGAGAGAAAT TACTGAAGTA TGGTGCTGCG 
GTACTGACTG ATGCTGAACT ACTCGCTATT TTTTTGCGTA CGGGTATTCC TGGGATGCAT 
GTGATGAAGA TGGCTGAGTA TTTAATTGAG ACATTTGGCT CACTGCATGG GTTGATATCT 
GCAGATTATC AAACGTTATG TGCCCATAAA GGGATTGGTG CATCCAAATA TAGTCAGATT 
CAGGCTATCG GTGAGCTGGC CTGTCGTTGT TTTTCATCTC ATCTGATGCG GGAAAGTGTT 
CTGCTTAACC CCGGTATCAC ACAAAAATTT CTGCAAAATA TACTGTCTCA CCGTGAACGA 
GAGATTTTTT TAGTCGTATT TTTGGATAAC CAGCATCGTG TTATTCGCCA TGAAGAGATG 
TTTACTGGTA CCATCAGCAG CGTAGAGGTC CATCCGAGAG AAATTGTGCG TGAAGCGCTG 
AAGGTTAATG CCGCCGCGCT GATTTTGGCG CATAATCATC CCTCTGGTAA GGCTGAACCG 
AGCCAAGCTG ACCGTTTGAT AACGACGCAG GTGATAAAAG CCTGTTCATT ATTAGATATT 
CGGGTGCTCG ATCATTTAGT AGTTGGCCGG GGTGAATGTG TCTCATTTGC TGAACGAGGA 
TGGCTTTAG 

 

Protein sequence

MDEWYGQVAP REKLLKYGAA VLTDAELLAI FLRTGIPGMH VMKMAEYLIE TFGSLHGLIS 
ADYQTLCAHK GIGASKYSQI QAIGELACRC FSSHLMRESV LLNPGITQKF LQNILSHRER 
EIFLVVFLDN QHRVIRHEEM FTGTISSVEV HPREIVREAL KVNAAALILA HNHPSGKAEP 
SQADRLITTQ VIKACSLLDI RVLDHLVVGR GECVSFAERG WL