| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A0052 |
|---|
| Symbol | slmA |
|---|
| ID | 5798517 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | - |
|---|
| Start bp | 59628 |
|---|
| End bp | 60224 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641338080 |
|---|
| Product | nucleoid occlusion protein |
|---|
| Protein accession | YP_001604692 |
|---|
| Protein GI | 162419507 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.881528 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 82 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGAAA AAGAAAATAC GAAAAGGAAC AGGCGCGAGG AAATATTGCA GGCTTTAGCG
CAGATGCTGG AATCCAGCGA CGGCAGCCAA CGCATTACTA CCGCGAAACT CGCCGCTAAT
GTGGGGGTTT CTGAAGCAGC GCTTTATCGG CATTTCCCCA GTAAAACGCG GATGTTTGAT
AGCCTGATCG AGTTTATTGA AGATAGTCTG ATGTCCCGCA TTAATTTGAT TCTACAAGAT
GAAAAAGAGA CGTTTAATCG CCTCCGCTTA ATCCTGCTGT TGGTATTAGG GTTTGCAGAA
CGCAACCCTG GGCTGACCCG AATCATGACC GGGCATGCGC TCATGTTTGA GCAGGATCGC
TTACAAGGGC GGATTAACCA GCTATTTGAA CGAATTGAAA TGCAGTTACG CCAAGTCCTT
CGTGAGAAAA AGCTGCGTGA TGGACAAGGC TTTATCCATG ATGAAGCGTT ACTGGCCACC
CAGTTGTTGG CATTTTGCGA AGGGATGCTT TCACGCTTCG TTCGTTCTGA ATTCCGTTAC
TGCCCAACAC AAGAGTTTGA TTCCCGCTGG CCATTGATTG TCGCCCAGTT GCAATAA
|
|---|
| Protein sequence | MAEKENTKRN RREEILQALA QMLESSDGSQ RITTAKLAAN VGVSEAALYR HFPSKTRMFD
SLIEFIEDSL MSRINLILQD EKETFNRLRL ILLLVLGFAE RNPGLTRIMT GHALMFEQDR
LQGRINQLFE RIEMQLRQVL REKKLRDGQG FIHDEALLAT QLLAFCEGML SRFVRSEFRY
CPTQEFDSRW PLIVAQLQ
|
|---|
| |