Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_0089 |
Symbol | |
ID | 5798425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010158 |
Strand | + |
Start bp | 60471 |
End bp | 65036 |
Gene Length | 4566 bp |
Protein Length | 1521 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641337984 |
Product | putative phage tail tape measure protein |
Protein accession | YP_001604601 |
Protein GI | 162417827 |
COG category | [R] General function prediction only |
COG ID | [COG3941] Mu-like prophage protein |
TIGRFAM ID | [TIGR01541] phage tail tape measure protein, lambda family [TIGR02675] tape measure domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 292 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 376 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCACAAA ACGTAGAGTT TATCCTGTCG CTGGAAGACA AGCAGTTTAC AGCGTCAATC GACCGGGCGG GTAAGCTACT TACCAGATTC GGGGAGCAGG CCACAAAGCC AGCTCAGAAA ATTAACAATC TGGAACGCTC GTTGGGTTCG GTCTCCCGCA TCATCGGCGT TCTGGAGTCC AAGCTCGATG TCACGGCAGA AAAACTACAG GATGTAGCTG CCGGCTTCGA GCTTGTGTCT GATGTTTCGC GCAAGACGCG AGGCAGCATT ACCAGCCTCA ACTCAGGTCT CAAAACCCTG ATTGAGCGCG TCGACACAAC CACCTCATCC GTTAATAAGC TCACCACATC GCTGCGCAAG GTTCAGTCTG AACTCAATGA GTTTTCCGAT TGGGCAACGT TCGCTGGCAA GAGCGCCAGC CGCTTCGGTA CGGAGGTAAA AGAAGCCTCT GCATCCGTGA GCGGCATGAA TACGCGTCTT AACACCACGA CAAAGCGTCT CAGTAATTGG GGTGTCACAA CGAGCCAGGC TGCTGAGGGG CTGAAGAAAG TCCGCGATCA GATGGATGCG GTGATTGGCC GCCAGCAACT GATCAGCAAG CCGGTACGTG TACGCACCAG TAGCTACGGT GATGGCGGTG GAGGTCGACA CAGCGGTTCC TATGGCCACG GCGGGCGTAG TGCTGAAAGT GGTGTGTTCT CTGGTCTGCG CGGCAACATT TTCTTGCTTG GCGAGATTGG TGATGCGGCA AGAACGGTAA CTGACATCCT GTTCGGCTGG CAGAAGCCAA TCATCGAAGC CGCCTCCGAA ATGGAGCGTA TGCGTGTCAT GTTGCGCGGG CTGAACAAGG ATAAGGCCAA CCCTGGAAAA GCCGCCGCAG AGGATATGCA GTACATCGTG GATATGGCGC AAAACGCCCC GTTTGCGATG CAGGCGCTGA CCGATTCCTT CGTTAAATTT CGCTCGGCAG GTCTCGATCC TACTGACGGA TCGCTGAAAG CACTGGTGGA CTCCGTTGCA CGCTTCGGCG GCGATAGCGA ACTGCTTAAA CGTGCTGCCG TGGCTGTCCA GCAGATGTCC GGTAAGGGCG TCGTGTCGAT GGAAGAACTG CGTCAGCAAT TAGGTGAAGC CGTTCCTAAC GCGATGAAGG CGATGGCAGA CGCTGCCGGT ATCACTATGG GGGAACTGAC CAAAGCAGTC TCCACCGGTA CTGTGGAAGC GAAACAGGCG CTATCGCTGA TGTTCGTTGG TCTGCGTGCG GAGAACGAAA ACGCCGCCAA AGACATGATG CAAACCTACA CCGGTGCGCT GGCGCAACTG CAAACCTCCT TTACGCTGTT TGCCGATCGT GTCGGTCAGG CGGGCTATCT GGATTCTCTC ACAAAGGGGA TGAAAGAGCT TGCTTCCATC ATGAACAGCG CTGAAGGCAT TTCGTTCGCT AACTCGCTGG GTTCCGGACT CTCCACGGCG ATCGACGGCT TACGCGAGCT GGCGCAGTGG CTGGCTAAAA ACCAGGAGCT GGTTATCAGC CTGGGCAAAG TCGTTGCCGC AATGGTGGCG TTCAAGCTGA TGCGTGCCGG GATTGCAGGC GTGATTGGCA CTGCCGGGCA AATGGTTAAC ACATTTACCA AGATGTCGAC CGTTCTCCAG GCTCCGTTCA ATCTGGGCGC GACAGCTGTC ACCCGCTTTA ATCGTGCGGC TCGTATGGGG CTGGCCCCAA TCCCATCGCT GATCTTCGCT ATCCGTGGCG CGATTACGGG GCTTCAGGGC GCGTTTGCTG GGCTAACTGC GTTCATTGCA GCAAACCCAA TTGGTGCAGC GTTCACCGTA GCTACCGTGG CTGTGGCCGG TCTTATCACG TATATGACCA TGCTCCGCAG CGAAACGTCC AAAGTCGTGG ACGAGATCCG CAAAATCCCG GAGGCGATGA CGGCGGCCAA GCGTGCGCAG ATGGCAGCGC GTGCAGCCGA GCTTGAAAAG CAGATCCAGC GAGACCAGCA GGCGCTTAAA ACTGGCGAAA GCGTGAACTA CTACTCCACA GCGGCTGGCC CTGTCGCCGT GAAGGAGTCC AAAGAGGTTG TTGAGGCTCG CCTGAAGAAA AATCAGGAAG AGTACGAAAG AACAACCGGC ACGATGGCGC TGGGTGATGG CGCAGTGGCC AAACGCCTGG CAAAAGAAGC TGCCGAATCC CAGATTGAGA AAATCCGGGC AGATAACCAG GTCTTCTCTG CGACGTTTGT GAAAGCCCGT CAGGAGGCTC TGGATAAGAT CCAGAAAATC AACGACGACA AATCGCTTTC GGACGACGAG AAGAACAAGC TGCTTGCACC GCTTCGCGAG AAGGTGAACA AGTCCTATCT GGAACCGGCA CAGAAGCTGG TCTACGACCT GTCTTCTCGT AAAAACGCCA CCGAGAAGCA AATTGCCCAC TTCAGCGACA TGCTGGAGAA AGCGAAGAAA GAGGGGAACA CCGAGCAGGT TCAGAAGCTG CAGGGCAGCA TCCGCGGGTA TCAGGAGCAT CTTGAAGCTG TAGCTCAGGA GCTGACTCAG GCGGAGTTCG AGCGTGATAG CGCGGCGAAA ACCGGTAAGG GCGTAATGTC CAACCAGGGC ACCGTTCTGG GGTTGGGGAC GACCGATAAG GCGGCTCAGA AAGCACTGGC GCAGTATATG CGGAACCAGA TGGACTCCGC GACCTACCAG CGCACACTGC CAGACGGTAC GGCGATGCTG GACTTCGAAG GCAAGCCGAT CATCGGGCCG AAACAGCTCA AAACCCAGCT GAACCTGCAG AAAGCCTCCA GCGCCAGCTC TCTGGAGAAA ATGAGCGACG AGGAACGTGC TGCCGCGATC GCCGCACTGA CCAAAGCGCG TGAGCAGGAC GCCGCAGCAG CGGAAAAAGC CGGGCAGCGT ACTGCCAATG CTTCTCAGCG TGCCGCGAGG AAGGAAGAAA ATGCGCAGCG TAAGCTGGCG GCCGGCTACC AGAAAGCCCT GGATAAAGCC GATCAGCTTA TGGGGCAGAT GGGGGAAAGC TCAAAAGCGA CCGTGTCGTT TGACCAGTCT CTCCGCGATA CCACCAAATC GCTGACCGAA CTGGCCAACG CCGTACCGAA TGAGTTCATC ACTCAGGAGA TGATCGACAA AGCCAAGTCA CGCCTCGCTG ACCTGGCGAA CGCGAGCGAC GACTATCGCG AGATGTTCAA CCGCCGCAAC GTCGAGCAGA TGATCTCCAC CTGGGCGCCG GAATCCGATT CCATCATCAG CGCGGGTTAC AAGCCGTCTC GTGAAGAGAA GGTGGCCGAT TTCAACGACA CCTACAACCG TAATCTGAAA GCGTTGATGG ATTTGCGTGA CCAGGCTTCT GATCCGAAAA TCGTGGCGCT CTACACCAAG CAGATTAACC AGCTGGTGGC GGCAGGCAAC ACCGCGCTCA TCAAAGAGAC GGGTACGGCG ACACAGAAGC TGGCGCTTGA GTACGAGAAT CTGGCCGAAC AGCTGGAAAA CAGCTGGAGC AACCTGTTCA GCAACATGAC GGATACGCTG ACCGACTTCG TCATGAAGGG GAAACTGGAC TTCTCCAGCC TGGCAGAGTC CATTCTCCGC GACATCACCA ACATGGTTGT GAAGACGCAG ATCACTCTAC CTCTCATGAA CATGCTGGGG ATGGGGACGA CGGCAGCGGG CAGCTCTCAG AGTGGCAATC TGCTTTCTGG TGTCGCGTCT GCGGTTGCCA ACCAGGGCGT CCGGATGAAT GCGGTCAACG GCGATAAGAG CGTGGGTGAG GCGACGAAAG AGACCTCCAG CTCGGTCTCC GGTCTGGGAC AGACCACTCA GCAGACGACC AGCGCGATTG GTTCTGCAAC CAACGCGATC GGCAACTGGG TAAATGGACT GTTCACCAGT ACTGAAGCCA AAGACGCGGA AACCAAAGCG GTGAAGACGT CCATCTTCTC CATGCAGAAC CTTAGCTCTG TCACGGGGGC GCTTTCTGCC GCGTTTGCTA TGCTGGGCGC AAACATGTCC GGCTCTGGCA ATAAGTGGTT GAGTTTCGGC GCTACCATTG CCTCCGGGCT GGTGTCTGCC TGGGCTGGTG GTGGCTTCGA TAACATCGGA TCTGGTTCCT CCGGCTCTAA CTCCGGATTC AACAATCTCA CCGGATCGGC ATCTGATGGT ACTGGCGGCA TTCCGGCAAT CCCGAAGTTC GCCAAAGGCG GCATTTTCGG GAAAGACGGC GTGGTTCCGC TGCGTGCTTA CCAGAAAGGT GGCATCGCTG ACTCTCCACA GCTGGCGTTA TTTGGCGAAG GGGATATGAA CGAAGCCTAC GTTCCTCTTC CGGATGGGCG TTCCATCCCG GTCACGCTCA ACGCAGAGGG TGTTAAAGGC GGCGGCGTTT TCTCACCTGT CAGCATTGAA ATCAACGTCA ACAGCGACGG CAGTGTCTCG GAGAACAGCA ATTCCGAAGG CGCATGGAGT CAGGCTGCGC AGCGCATGAA GGCGATCGCG CTTGAAACCA TCGCTCAGGA GAAGCGGCCA GGCGGTTCGC TCAACCCTAA CTCTCAACGT AACTAA
|
Protein sequence | MSQNVEFILS LEDKQFTASI DRAGKLLTRF GEQATKPAQK INNLERSLGS VSRIIGVLES KLDVTAEKLQ DVAAGFELVS DVSRKTRGSI TSLNSGLKTL IERVDTTTSS VNKLTTSLRK VQSELNEFSD WATFAGKSAS RFGTEVKEAS ASVSGMNTRL NTTTKRLSNW GVTTSQAAEG LKKVRDQMDA VIGRQQLISK PVRVRTSSYG DGGGGRHSGS YGHGGRSAES GVFSGLRGNI FLLGEIGDAA RTVTDILFGW QKPIIEAASE MERMRVMLRG LNKDKANPGK AAAEDMQYIV DMAQNAPFAM QALTDSFVKF RSAGLDPTDG SLKALVDSVA RFGGDSELLK RAAVAVQQMS GKGVVSMEEL RQQLGEAVPN AMKAMADAAG ITMGELTKAV STGTVEAKQA LSLMFVGLRA ENENAAKDMM QTYTGALAQL QTSFTLFADR VGQAGYLDSL TKGMKELASI MNSAEGISFA NSLGSGLSTA IDGLRELAQW LAKNQELVIS LGKVVAAMVA FKLMRAGIAG VIGTAGQMVN TFTKMSTVLQ APFNLGATAV TRFNRAARMG LAPIPSLIFA IRGAITGLQG AFAGLTAFIA ANPIGAAFTV ATVAVAGLIT YMTMLRSETS KVVDEIRKIP EAMTAAKRAQ MAARAAELEK QIQRDQQALK TGESVNYYST AAGPVAVKES KEVVEARLKK NQEEYERTTG TMALGDGAVA KRLAKEAAES QIEKIRADNQ VFSATFVKAR QEALDKIQKI NDDKSLSDDE KNKLLAPLRE KVNKSYLEPA QKLVYDLSSR KNATEKQIAH FSDMLEKAKK EGNTEQVQKL QGSIRGYQEH LEAVAQELTQ AEFERDSAAK TGKGVMSNQG TVLGLGTTDK AAQKALAQYM RNQMDSATYQ RTLPDGTAML DFEGKPIIGP KQLKTQLNLQ KASSASSLEK MSDEERAAAI AALTKAREQD AAAAEKAGQR TANASQRAAR KEENAQRKLA AGYQKALDKA DQLMGQMGES SKATVSFDQS LRDTTKSLTE LANAVPNEFI TQEMIDKAKS RLADLANASD DYREMFNRRN VEQMISTWAP ESDSIISAGY KPSREEKVAD FNDTYNRNLK ALMDLRDQAS DPKIVALYTK QINQLVAAGN TALIKETGTA TQKLALEYEN LAEQLENSWS NLFSNMTDTL TDFVMKGKLD FSSLAESILR DITNMVVKTQ ITLPLMNMLG MGTTAAGSSQ SGNLLSGVAS AVANQGVRMN AVNGDKSVGE ATKETSSSVS GLGQTTQQTT SAIGSATNAI GNWVNGLFTS TEAKDAETKA VKTSIFSMQN LSSVTGALSA AFAMLGANMS GSGNKWLSFG ATIASGLVSA WAGGGFDNIG SGSSGSNSGF NNLTGSASDG TGGIPAIPKF AKGGIFGKDG VVPLRAYQKG GIADSPQLAL FGEGDMNEAY VPLPDGRSIP VTLNAEGVKG GGVFSPVSIE INVNSDGSVS ENSNSEGAWS QAAQRMKAIA LETIAQEKRP GGSLNPNSQR N
|
| |