Gene YpAngola_0080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_0080 
Symbol 
ID5798362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010158 
Strand
Start bp55651 
End bp56313 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content53% 
IMG OID641337975 
ProductIg-like domain-containing protein 
Protein accessionYP_001604592 
Protein GI162417850 
COG category[N] Cell motility 
COG ID[COG5492] Bacterial surface proteins containing Ig-like domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones547 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones539 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGAAC AAAAGATGAA GATCACGGAA GAGGCGTTTT CGGATTTCAC GGGGCATATG 
TGCCGTGCCG GATTCACCAA TTCCATCTCC AACGAGCCTC TGAGCGAGCG CCAGCAGAAT
CATCTTGCGG CTTGCTTCCG GGCAATTCCG TTCACTCAGT CTGTCACCAT TACACCGACT
GCGCCGTCCG TATTGGTGGG CAAAACCGTT CAACTTAGTG CAGGTATCAC CATGAGCAAA
AGTGCAGATT CATTCACCTG GACGTCAGAC AATGACCGGG TCGCCACAGT CAGCGGTACG
GGTCTGGTTA CTGGCGTGAC TCCGGGCAAA GTGAAGATCA CCGCCACCGA TAAGCAGACT
CAGCTTTCTG CCTCAGTCGA AGTGATCGTT AAGCCTGTCA GCGTGGAGTC CGTAACCGTA
ACGCCTGACT CTACCTCCGT TGAGAAGGGG AAATCGGTCA AGTTGCGTGT TGATGTACAA
CCGTCAAATG CAACCAATAA AAAAGTCACC TGGACTTCCA AAAATAGCGA CAAAGCGACT
GTTGACCAGA ACGGTAACGT AGCTGGCGTA GCCGTTGGTA CGGCAACTAT TGAAGTGGTT
TCGCAGGATG GCAGCCACAA AGCTACTGCG ACTGTGGAAG TGACTGCAGC ACCGGCTGCG
TAA
 
Protein sequence
MPEQKMKITE EAFSDFTGHM CRAGFTNSIS NEPLSERQQN HLAACFRAIP FTQSVTITPT 
APSVLVGKTV QLSAGITMSK SADSFTWTSD NDRVATVSGT GLVTGVTPGK VKITATDKQT
QLSASVEVIV KPVSVESVTV TPDSTSVEKG KSVKLRVDVQ PSNATNKKVT WTSKNSDKAT
VDQNGNVAGV AVGTATIEVV SQDGSHKATA TVEVTAAPAA