Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | COXBURSA331_A2186 |
Symbol | deoC |
ID | 5793379 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Coxiella burnetii RSA 331 |
Kingdom | Bacteria |
Replicon accession | NC_010117 |
Strand | - |
Start bp | 1989156 |
End bp | 1989881 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641331510 |
Product | deoxyribose-phosphate aldolase |
Protein accession | YP_001597796 |
Protein GI | 161831613 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0274] Deoxyribose-phosphate aldolase |
TIGRFAM ID | [TIGR00126] deoxyribose-phosphate aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.446123 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTCAG ACTTTGCAAA AACCTTGATT CCTTTAATTG ATTTAACTCG ATTAAATGAA GATGACACGC CAGAGACTAT CGAACAATTA TGTCATCAAG CAAAAACTCC TTATGGGCCC GTGGCAGCCG TTTGTATCTA TCCTCAATTT GTTAAACAAG CCCGTTTTTT GTTAGCAGGC GTTCCCATAA AAGTGGCAAC CGTTGCTAAT TTCCCTAAAG GCGATCAATC ACGAGTCGAT TGCATTCAGT CGATTAAACA ATCGCTCGAT GAGGGGGCTG ATGAAATTGA TGTGGTTATG CCTTATAAAA GCTACCTCGA AGGGAACACG AAGGAGGTCA GAGCCTTCCT AGAAGCCTGT CGCGGCACGT GCGGCCCCCA GGCAATTTTG AAAGTGATTT TAGAAACCGG CGCATTAATT AAACGCGATA TTATTTTCGA CGCTACGAAG CTAGCCATTC ACGCCGGCGC TGATTTTATT AAAACTTCAA CGGGAAAGCT TCCTAGCGGA GCAACGATAG AAGCGGCTGA AATAATATTA GAAGCGATTC AAAATCACGC CAATAAAAGA GTCGGCTTAA AAATCTCTGG CGGAATTCAA ACATTCGAAC AAGCCGTCCC CTATATTCAA TTAATTAAAG ATAAAATGGG CGCTGCTTGG ATTACTCCGC AAACTATACG CTTCGGGGCC AGTCGGCTGT TAGCCGACAT TATGCAGTGC CTTTAA
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Protein sequence | MNSDFAKTLI PLIDLTRLNE DDTPETIEQL CHQAKTPYGP VAAVCIYPQF VKQARFLLAG VPIKVATVAN FPKGDQSRVD CIQSIKQSLD EGADEIDVVM PYKSYLEGNT KEVRAFLEAC RGTCGPQAIL KVILETGALI KRDIIFDATK LAIHAGADFI KTSTGKLPSG ATIEAAEIIL EAIQNHANKR VGLKISGGIQ TFEQAVPYIQ LIKDKMGAAW ITPQTIRFGA SRLLADIMQC L
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