| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | COXBURSA331_A1407 |
|---|
| Symbol | |
|---|
| ID | 5793880 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Coxiella burnetii RSA 331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010117 |
|---|
| Strand | + |
|---|
| Start bp | 1288517 |
|---|
| End bp | 1289263 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641330817 |
|---|
| Product | OmpA-like transmembrane domain-containing protein |
|---|
| Protein accession | YP_001597112 |
|---|
| Protein GI | 161830804 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000000000000607523 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAAAA AAATTGTAAT TGGCGTGACA GCCACTGCTG CTTTTGGTAT TGGCGCCGGC
GCATTAGCGG GCGGATCGGT TGATCAATCA TATAATAATA CCAGTGGTGC TGGTTTTTAT
GTTCGTGGTG AAGCAGGTTA TGGGTTGGTC GATAAAAAAT CGGGCACTTC TAAAGTCAAT
TTCACTGGCG TAACGCTAAC CGAAAACTCC CACACTAATA CCAAAAAAAG CCGAGGCTTT
AACGGTCGAG TTGCCATTGG TTATGCTTTC AATCCTTACT TCTCATTAGA ATCAGGGTTT
ACTTACTACC ACCCTGCTTA CCGAGATGTA AACATAGCGG GAAGTGCGTT GCCTCTTTTC
TCTTCCGTAC AAGCCGAAGG CAGACAAAAA ATAAACTTGT ACTCTATTGA TTTAATGGGC
AAAGCGACCT TACCTATCGA TAACTTCTAT GCTTTTATCG AGGGTGGTGT TGCTTATGTG
CATACTAAGT TTGCCGCGTT TACAGAAACG GGTACCGCGG TTAGTCCTCT CCTCCCTCCC
GTAACTAGTT CTGTGGCTGT TAAGGTTCCG TCAAGCTCCA AAGGCTATAT TCGACCGAAA
GCCGGCATCG GTGTGGGCTA TAATATCACC CAGAACATTG GCGTTGATGT TTCCTACTCA
CGTGTCTTTG GTCAAGGGAA AATCAATAAC ACTAACTACT TGCCTAACTT GAACGCAGTT
ACGCTGGGCT TAACTTACAA GTTCTAA
|
|---|
| Protein sequence | MLKKIVIGVT ATAAFGIGAG ALAGGSVDQS YNNTSGAGFY VRGEAGYGLV DKKSGTSKVN
FTGVTLTENS HTNTKKSRGF NGRVAIGYAF NPYFSLESGF TYYHPAYRDV NIAGSALPLF
SSVQAEGRQK INLYSIDLMG KATLPIDNFY AFIEGGVAYV HTKFAAFTET GTAVSPLLPP
VTSSVAVKVP SSSKGYIRPK AGIGVGYNIT QNIGVDVSYS RVFGQGKINN TNYLPNLNAV
TLGLTYKF
|
|---|
| |