| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | COXBURSA331_A1299 |
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| Symbol | mfd |
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| ID | 5793664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Coxiella burnetii RSA 331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010117 |
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| Strand | + |
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| Start bp | 1173927 |
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| End bp | 1177400 |
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| Gene Length | 3474 bp |
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| Protein Length | 1157 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641330724 |
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| Product | transcription-repair coupling factor |
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| Protein accession | YP_001597022 |
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| Protein GI | 161831377 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
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| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATTAAAG TTGAAATGAC TCCGATAAGC CCTTTACAAC CTCCCATTCC TCGCTCCATT
GACAATCGAC TCCAATGGGG GAATTTAAAA GGTGATAGCG TCAGCCTTGC AATCAGCACT
CTTGCGGAAA AAAATCAGGG GCCTTTGTTA TTAATCACAC CGGATGTTCA CTCGGCTAAT
TATTTACACC GTTCATTGCC ATTTTTTTCT AGCGCCGACA CCCCTATCTT ACATTTTCCT
GACTGGGAAA CATTGCCATA CGATTATTTT TCCCCCCACG AAGATATTAT TTCTGAACGC
TTGCTAACGC TTTACCGCTT ACCGCGTTTA TCGTCAGGAA TTATCATCAG CGCTCTTCCC
ACCTTATTAC AACGCCTTCC TCCCGCCGAT CACTTAGAAA AAAATACTTT TATTTTATCC
GTGGGTGAAA AGTTTTCTTT GCAAGAAAAT CGTGAACGTT TAATATCGGC GGGTTACCGT
TCCGTTCAAC AAGTGATGGA ACATGGTGAA TATGCTCAAC GCGGGTCGAT CATCGATATT
TACCCCATGG GAAGCCCACT TCCTTACCGA ATCGAATTAT TTGACGATGA AGTAACAAGC
ATTCGCAGCT TTGATCCCGA AAGCCAGCGA TCCGTAGAAA AAATAGAATC GGTTCGGTTG
TTACCGGCGA GAGAATACCC GTTAACGAAA GAAGCCATTA CGCATTTTCG ACAATCGTGG
CGTGCAAAAT TCTTGGGTAA CCCGCAAGAG GCTCCTATTT ATCAGCAAAT CAGTGAAGGA
GAAGCGGCGG CCGGTATTGA ATATTATTTA CCGTTGTTCT TCGAAACCAC CCAAACTTTT
TTTTCCTATT TGCCGAAGAA TACCACCGTT ATTTTATTTG AAAAACTGGA AACCGTTGCT
CATCAGTTTT GGCAAGAAGT AGAACATCGT TATGAACAAT TACGCCACGA TTTAACACGA
CCGCTCTGCC CGCCCTCAGA ATTGTTTTTG TCTTTTGAGC AATTAAGGAT AGAAATAAAA
AATCATACTC AAATAAAAAT TAGCGATGCA CCCATCATTG AAAAAACAGG GCAAGTTAAC
TTTGCTACGG AAAATTTCCC TCCTTTATTA ATTGATCATA AAGCTTCCCA ACCGTTTGCT
CGATTAAAAA ACTTTTTACA TGAAATAACG GCTATTCAAG GGGGGCGCGT TTTATTTTGT
GCCGAAACAG ACGGCCGTCG AGAAACTCTT CTAGAATTCC TTAAAGAAAT TGATACAACT
CCTCAAGCCG TTAAAAATTG GCGAACGTTT TTAGCAGAGA ATACGCGAGT TGGCCTTACT
ATCGCGCCTT TGGATAAAGG CGTTTTATTA TCCAGCCCGC CTTTGGCCAT TATTTCAGAA
TCACAACTCT TCGGCGAACA AATCCGCCAA CGTCGCTTGG GAAAAGAACG AAAAATTGAT
CCCAATTTAT TGATTCGCAA TTTAACAGAA TTGCATATTG GCGACCCCGT GGTTCACATC
CAACATGGAG TCGGCCGTTA TTTGGGCTTG CAAACCATTA AAACCAGCGA TCAGGAAGCT
GAATATTTAA CTTTACAATA TGCGGATAAT GACAAAATTT ATGTGCCAGT TTCTTCGCTG
TATTTAATCA GCCGTTATGC CGGTGCTGAC GCTTCCCATG CTCCCCTTCA AAAACTCGGC
AGCAAACAGT GGGAAAAAAT CAAAGAAAAA ACACAAAAAC ATATCCGTGA TGTGGCGGCC
GAATTATTAG ATATTTACAG CCGCCGTCAA GCGGCAACGG GTTTTACTTT TTCTATACCT
GAAAAAGAAT ACTCTCTTTT CCGCCAAGCT TTTCCTTTTG AAGAAACACC TGACCAAAGT
GCCGCCATTA ATGACGTTAT TGTCGATATG TCTTCAAAAC GCAGTATGGA CCGCCTCATT
TGTGGGGATG TTGGTTTTGG AAAAACCGAA GTGGCAATGC AAGCCGCTTT TATAGCCGTG
CAGAATAATA AACAAGTCGC TGTTTTAGTT CCAACGACTT TATTAGCCGA ACAACATTTT
TATAATTTTC AAGATCGTTT TGCCGACTGG CCGGTTCGTA TTGCCGCTAT TTCTCGCTTA
CGCACCCAAA AACAACGCCA GCAAATTACC CAAGAACTGG CTGAAGGGAA AATAGATATT
ATTATCGGCA CTCATAAATT ATTAAGCAAA GATATCCGAT TTAAAGATTT AGGTTTATTA
ATTGTTGATG AAGAACACCG TTTCGGCGTT ACCCAAAAAG AACGAATTAA ATCCTTACGC
GCCCATGTGG ATATTCTGAC GCTCACAGCC ACGCCGATCC CTCGAACATT GAATATGTCG
CTTTCAGGTA TTCGCGACTT GTCCCTTATT ACAACCCCGC CGGCGAAACG CCTGTCTGTA
AAAACTTTTG TGCACGACTA CAGTCCCGTC TTAATTCGCG AAGCGATATT GCGCGAAAAT
TTACGCGGCG GCCAAGTTTA TTTTTTACAT AATGATGTCG CAACGCTCGC CGCAACGGCT
GAAAAATTAC GAACGATTAT TCCCGAAGCC CGTCTTGCGA TCGCCCACGG TCAAATGCGT
GAACGTGATT TGGAACGAGT AATGTCCGAT TTTTATCATC AGAAATATAA TCTTTTGGTT
TGTACAACCA TTATTGAGTC AGGGATCGAT ATTCCCACTG CGAATACGAT TATTATTAAT
CGCGCGGATC GATTCGGCTT AGCTCAACTC CACCAACTTC GCGGTCGCGT CGGGCGTTCT
CATCACCAAG CCTATGCTTA TTTATTAATA CCTGATCAAG AAGCCCTGAC GGCGGATGCA
GAAAAACGAT TGAGCGCTAT TTCCCAACTG GATGATCTCG GTGTTGGTTT TAACCTGGCG
ACTCATGATT TAGAAATCCG CGGCGCAGGC GAATTATTGG GCGTCGAGCA AAGCGGACAA
ATTCATGATA TCGGATTTTC TTTATATTTA GAATTGCTGG AAGAGGCGGT AAGCGCATTA
AAAGCCGGAC GGGAACCCCA ATTTGAAAAG CCATTACACG CAGTGTCTGA AATTGATCTT
GGCATTACGA CGCTTTTACC GGAAGATTAT GTCCCCGATG TTAATGCTCG TCTTATTCTT
TATAAGCGCT TAGCTAATTG CAAAAATAAA AGAGAAATCC AGGCGCTCAA AGAAGAGCTT
ATCGATCGTT TTGGCCCGCT ACCCCCAGCA GCTCAACATT TGCTCCAATC TGCCGAACTG
CGCTTAATTG CAAACGAACT CGGCATCCAA AAAATCAATA TCGGCTCCAA ATATGGCTAT
TTTCACTTCG ATAAAAAACC CGCCATTGAT CTCACAAAGT TAATCAAGTT AGTCCAAACC
CAACCCCAAC GTTACCAACT GCAAGGCGAT GAATCCCTGC GTTTCATTCT TTCTAATCCC
ACCCCCCAAT CCAAATTGGA AACTATCTAC GAATTAATTA AAAATTTGAA GTAA
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| Protein sequence | MIKVEMTPIS PLQPPIPRSI DNRLQWGNLK GDSVSLAIST LAEKNQGPLL LITPDVHSAN
YLHRSLPFFS SADTPILHFP DWETLPYDYF SPHEDIISER LLTLYRLPRL SSGIIISALP
TLLQRLPPAD HLEKNTFILS VGEKFSLQEN RERLISAGYR SVQQVMEHGE YAQRGSIIDI
YPMGSPLPYR IELFDDEVTS IRSFDPESQR SVEKIESVRL LPAREYPLTK EAITHFRQSW
RAKFLGNPQE APIYQQISEG EAAAGIEYYL PLFFETTQTF FSYLPKNTTV ILFEKLETVA
HQFWQEVEHR YEQLRHDLTR PLCPPSELFL SFEQLRIEIK NHTQIKISDA PIIEKTGQVN
FATENFPPLL IDHKASQPFA RLKNFLHEIT AIQGGRVLFC AETDGRRETL LEFLKEIDTT
PQAVKNWRTF LAENTRVGLT IAPLDKGVLL SSPPLAIISE SQLFGEQIRQ RRLGKERKID
PNLLIRNLTE LHIGDPVVHI QHGVGRYLGL QTIKTSDQEA EYLTLQYADN DKIYVPVSSL
YLISRYAGAD ASHAPLQKLG SKQWEKIKEK TQKHIRDVAA ELLDIYSRRQ AATGFTFSIP
EKEYSLFRQA FPFEETPDQS AAINDVIVDM SSKRSMDRLI CGDVGFGKTE VAMQAAFIAV
QNNKQVAVLV PTTLLAEQHF YNFQDRFADW PVRIAAISRL RTQKQRQQIT QELAEGKIDI
IIGTHKLLSK DIRFKDLGLL IVDEEHRFGV TQKERIKSLR AHVDILTLTA TPIPRTLNMS
LSGIRDLSLI TTPPAKRLSV KTFVHDYSPV LIREAILREN LRGGQVYFLH NDVATLAATA
EKLRTIIPEA RLAIAHGQMR ERDLERVMSD FYHQKYNLLV CTTIIESGID IPTANTIIIN
RADRFGLAQL HQLRGRVGRS HHQAYAYLLI PDQEALTADA EKRLSAISQL DDLGVGFNLA
THDLEIRGAG ELLGVEQSGQ IHDIGFSLYL ELLEEAVSAL KAGREPQFEK PLHAVSEIDL
GITTLLPEDY VPDVNARLIL YKRLANCKNK REIQALKEEL IDRFGPLPPA AQHLLQSAEL
RLIANELGIQ KINIGSKYGY FHFDKKPAID LTKLIKLVQT QPQRYQLQGD ESLRFILSNP
TPQSKLETIY ELIKNLK
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