Gene COXBURSA331_A1124 details

Gene Information

• Locus tag: COXBURSA331_A1124
• Symbol: rfaH
• ID: 5793394
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Coxiella burnetii RSA 331
• Kingdom: Bacteria
• Replicon accession: NC_010117
• Strand: -
• Start bp: 1003523
• End bp: 1004026
• Gene Length: 504 bp
• Protein Length: 167 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 641330576
• Product: transcriptional activator RfaH
• Protein accession: YP_001596878
• Protein GI: 161830667
• COG category: [K] Transcription
• COG ID: [COG0250] Transcription antiterminator
• TIGRFAM ID: [TIGR01955] transcriptional activator RfaH

Plasmid Coverage information

• Num covering plasmid clones: 52
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTCAACGG ATAGCGATTG GTATCTTATT TATACAAAAC CTCGCCAAGA AAGAATAGCC 
GAGGAAAATT TAGAACGCCA AGGCTATAGA ATTTATCTGC CATTTATTCA AGTTAATAGA 
CGGCGATTGG GGTGTTATCA ACTGATTACC GAGCCTTTAT TTCCTCGTTA TCTTTTTATT 
TTGTTAAATA TCGATAAGGA TAATTGGGGG CCTATACGTT CAACGCGCGG TGTTTCTGCA 
TTGGTTCGTT TTGGCGGGAT TCCTGCAAAA GTACCTCCAG ATTTCGTTCA ATTTTTAAAA 
AACAACGAAA CTTCTGCGAG CGTGCCGCCT AAAGTTTCTC TTTTCCAAAA GGGGCAACGT 
GTTCAAATAA TCGACGGCGT TATGGCGGGT TATGAGGGGG TTTTTGAAAT GTACTCGGGC 
GCTAAACGAG TCACTTTGTT ATTGGACATG GTTGGTAAAG TAACCCGTGT TGAAGTGCCG 
TTGGATTCGG TGACAGGAAC TTGA 

 

Protein sequence

MSTDSDWYLI YTKPRQERIA EENLERQGYR IYLPFIQVNR RRLGCYQLIT EPLFPRYLFI 
LLNIDKDNWG PIRSTRGVSA LVRFGGIPAK VPPDFVQFLK NNETSASVPP KVSLFQKGQR 
VQIIDGVMAG YEGVFEMYSG AKRVTLLLDM VGKVTRVEVP LDSVTGT